Package: Glimma
Type: Package
Title: Interactive visualizations for gene expression analysis
Version: 2.22.0
Authors@R: 
    c(
        person(
            "Shian", "Su",
            role = c("aut", "cre"),
            email = "su.s@wehi.edu.au"
        ),
        person(
            "Hasaru", "Kariyawasam",
            role = c("aut")
        ),
        person(
            "Oliver", "Voogd",
            role = c("aut")
        ),
        person(
            "Matthew", "Ritchie",
            role = c("aut")
        ),
        person(
            "Charity", "Law",
            role = c("aut")
        ),
        person(
            "Stuart", "Lee",
            role = c("ctb")
        ),
        person(
            "Isaac", "Virshup",
            role = c("ctb")
        )
    )
Description: This package produces interactive visualizations for
        RNA-seq data analysis, utilizing output from limma, edgeR, or
        DESeq2. It produces interactive htmlwidgets versions of popular
        RNA-seq analysis plots to enhance the exploration of analysis
        results by overlaying interactive features. The plots can be
        viewed in a web browser or embedded in notebook documents.
Encoding: UTF-8
RoxygenNote: 7.3.2
biocViews: DifferentialExpression, GeneExpression, Microarray,
        ReportWriting, RNASeq, Sequencing, Visualization
Depends: R (>= 4.0.0)
Imports: htmlwidgets, edgeR, DESeq2, limma, SummarizedExperiment,
        stats, jsonlite, methods, S4Vectors
Suggests: testthat, knitr, rmarkdown, BiocStyle, IRanges,
        GenomicRanges, pryr, AnnotationHub, scRNAseq, scater, scran,
        scRNAseq,
License: GPL-3
URL: https://github.com/hasaru-k/GlimmaV2
BugReports: https://github.com/hasaru-k/GlimmaV2/issues
VignetteBuilder: knitr
Config/pak/sysreqs: cmake make libuv1-dev zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 12:43:16 UTC
RemoteUrl: https://github.com/bioc/Glimma
RemoteRef: RELEASE_3_23
RemoteSha: a28b515013b9d11b20c07b2501cceb4a2a9c886f
NeedsCompilation: no
Packaged: 2026-04-29 16:32:29 UTC; root
Author: Shian Su [aut, cre],
  Hasaru Kariyawasam [aut],
  Oliver Voogd [aut],
  Matthew Ritchie [aut],
  Charity Law [aut],
  Stuart Lee [ctb],
  Isaac Virshup [ctb]
Maintainer: Shian Su <su.s@wehi.edu.au>
Built: R 4.6.0; ; 2026-04-29 16:43:00 UTC; windows
