| CCPROMISE-package | PRojection Onto the Most Interesting Statistical Evidence with Canonical Correlation |
| CANN | Canonical Correlation of Two Sets of Genomic Data |
| CCPROMISE | PROMISE Analysis with Canonical Correlation for Two Forms of Genomic Data |
| exmplESet | Example of Conceptual Expression Set |
| exmplGeneSet | Example of Conceptual Gene Annotation |
| exmplMSet | Example of Conceptual Methylation Set |
| exmplPat | Example of Conceptual Phenotype Pattern Definition Set |
| PrbCor | Probe Level Correlation of Two Sets of Genomic Data |
| PrbPROMISE | PROMISE Analysis with Two Forms of Genomic Data at Probe Level |
| PROMISE2 | PROMISE Analysis of Two Genomic Sets |