Individual-Specific ceLl typE referencing Tool

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Documentation for package ‘ISLET’ version 1.11.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

caseEst	ISLET reference estimation results extraction
ctrlEst	ISLET reference estimation results extraction
dataPrep	Data preparation step utility function before using ISLET
dataPrepSlope	Data preparation function specifically for slope effect testing
GE600	ISLET deconvolution example raw input data
GE600age	ISLET example datasets for slope variable testing in csDE
GE600age_se	ISLET example datasets for slope variable testing in csDE
GE600_se	ISLET deconvolution example raw input data
imply	_*imply*_: _*imp*_roving ce_*l*_l-t_*y*_pe deconvolution using personalized reference
implyDataPrep	Data preparation step utility function before using imply
isletSolve	Solving individual-specific and cell-type-specific reference panels
isletTest	Testing for cell-type-specific Differential Expression (csDE) genes