Plots data (continuous/discrete) along chromosomal ideogram
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Documentation for package ‘IdeoViz’ version 1.45.0
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| IdeoViz-package | Plots continuous or discrete data along chromosomal ideogram |
| avgByBin | Aggregates data by genomic bins |
| binned_fullGenome | Data for example 3. |
| binned_multiSeries | Data for vignette example 1. |
| binned_singleSeries | Data for example 2. |
| getBins | getBins |
| getIdeo | Download ideogram table from UCSC |
| GSM733664_broadPeaks | Data for vignette example 4. |
| hg18_ideo | Ideogram table for hg18 |
| plotChromValuePair | Base function which plots the ideogram and superimposed data for a single chromosome. plotOnIdeo() calls this function and stacks the resulting output. |
| plotOnIdeo | Plot data superimposed on chromosomal ideogram |
| wins | Data for vignette example 1. |
| wins_discrete | Data for example 2. |
| wins_entiregenome | Data for example 3. |