| compareLists | Compare Ordered Lists with Weighted Overlap Score |
| getOverlap | Extracting the Intersecting IDs From a listComparison Object |
| OL.data | Gene Expression and Clinical Information of Two Cancer Studies |
| OL.result | Three Examples of Class 'OrderedList' |
| OrderedList | Detecting Similarities of Two Microarray Studies |
| plot.listComparison | Compare Ordered Lists with Weighted Overlap Score |
| plot.listComparisonOverlap | Extracting the Intersecting IDs From a listComparison Object |
| plot.OrderedList | Plotting Function for OrderedList Objects |
| prepareData | Combining Two Studies into an Expression Set |
| print.listComparison | Compare Ordered Lists with Weighted Overlap Score |
| print.listComparisonOverlap | Extracting the Intersecting IDs From a listComparison Object |
| print.OrderedList | Printing Function for OrderedList Objects |