Outlier profile and pathway analysis in R

---

Documentation for package ‘oppar’ version 1.37.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

oppar-package	oppar: A package for outlier profile and pathway analysis.
$-method	A S4 class for the output of OPPAR main function, opa.
bcm	Breast cancer metastases from different anatomical sites
eset	Tomlins et al. Prostate Cancer data (GEO: GSE6099)
getSampleOutlier	Retrieving outlier genes in samples
getSampleOutlier-method	Retrieving outlier genes in samples
getSubtypeProbes	Retrieving outlier genes from a group of related samples
getSubtypeProbes-method	Retrieving outlier genes from a group of related samples
gsva	gsva
gsva-method	gsva
maupin	Maupin's TGFb data and a TGFb gene signature
opa	Outlier profile Analysis
opa-method	Outlier profile Analysis
oppar	oppar: A package for outlier profile and pathway analysis.
OPPARList-class	A S4 class for the output of OPPAR main function, opa.
show-method	A S4 class for the output of OPPAR main function, opa.