Spaced Words Projection (SWeeP)

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Documentation for package ‘rSWeeP’ version 1.21.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

rSWeeP-package	rSWeeP - Alignment-free method for vectorising biological sequences
extractHDV	Function for obtaining the HDV (High Dimensional Vector) matrix
extractHDV-method	Function for obtaining the HDV (High Dimensional Vector) matrix
orthBase	Generate a orthonormal matrix
PCCI	PhyloTaxonomic Consistency Cophenetic Index
PMPG	Percentage of Mono or Paraphyletic Groups
rSWeeP	rSWeeP - Alignment-free method for vectorising biological sequences
SWeeP	Spaced Words Projection
SWeeP-method	Spaced Words Projection
SWeePlite	Spaced Words Projection lite
SWeePlite-method	Spaced Words Projection lite