# Generated by roxygen2: do not edit by hand

export(motifEnrichment)
export(plotSensitivity)
export(plotSpecificity)
export(returnSensitivity)
export(returnSpecificity)
importFrom(BSgenome,getBSgenome)
importFrom(Biostrings,BString)
importFrom(Biostrings,DNAString)
importFrom(Biostrings,DNAStringSet)
importFrom(Biostrings,PDict)
importFrom(Biostrings,getSeq)
importFrom(Biostrings,vcountPDict)
importFrom(Biostrings,width)
importFrom(GenomeInfoDb,"seqlengths<-")
importFrom(GenomeInfoDb,keepSeqlevels)
importFrom(GenomeInfoDb,seqlengths)
importFrom(GenomeInfoDb,seqlevels)
importFrom(GenomeInfoDb,seqlevelsInUse)
importFrom(GenomeInfoDb,seqnames)
importFrom(GenomicRanges,"end<-")
importFrom(GenomicRanges,"start<-")
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,end)
importFrom(GenomicRanges,findOverlaps)
importFrom(GenomicRanges,makeGRangesFromDataFrame)
importFrom(GenomicRanges,seqnames)
importFrom(GenomicRanges,shift)
importFrom(GenomicRanges,start)
importFrom(GenomicRanges,strand)
importFrom(GenomicRanges,trim)
importFrom(GenomicRanges,width)
importFrom(S4Vectors,"mcols<-")
importFrom(S4Vectors,elementNROWS)
importFrom(S4Vectors,mcols)
importFrom(S4Vectors,queryHits)
importFrom(ggplot2,aes)
importFrom(ggplot2,annotate)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,theme_void)
importFrom(methods,is)
importFrom(reshape2,melt)
importFrom(stats,median)
importFrom(stats,p.adjust)
importFrom(stats,pbinom)
importFrom(stats,phyper)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
