1. Dictionary           1. Dictionary
2. Cell coordinates and cell indices
                        2. Cell coordinates and cell indices
affxparser-package      Package affxparser
applyCdfGroupFields     Applies a function to a list of fields of each
                        group in a CDF structure
applyCdfGroups          Applies a function over the groups in a CDF
                        structure
compareCdfs             Compares the contents of two CDF files
compareCels             Compares the contents of two CEL files
convertCdf              Converts a CDF into the same CDF but with
                        another format
convertCel              Converts a CEL into the same CEL but with
                        another format
createCel               Creates an empty CEL file
findCdf                 Search for CDF files in multiple directories
readBpmap               Parses a Bpmap file
readCcg                 Reads an Affymetrix Command Console Generic
                        (CCG) Data file
readCcgHeader           Reads an the header of an Affymetrix Command
                        Console Generic (CCG) file
readCdfCellIndices      Reads (one-based) cell indices of units
                        (probesets) in an Affymetrix CDF file
readCdfGroupNames       Reads group names for a set of units
                        (probesets) in an Affymetrix CDF file
readCdfHeader           Reads the header associated with an Affymetrix
                        CDF file
readCdfUnitNames        Reads unit (probeset) names from an Affymetrix
                        CDF file
readCdfUnits            Reads units (probesets) from an Affymetrix CDF
                        file
readCel                 Reads an Affymetrix CEL file
readCelHeader           Parsing the header of an Affymetrix CEL file
readCelIntensities      Reads the intensities contained in several
                        Affymetrix CEL files
readCelRectangle        Reads a spatial subset of probe-level data from
                        Affymetrix CEL files
readCelUnits            Reads probe-level data ordered as units
                        (probesets) from one or several Affymetrix CEL
                        files
readChp                 A function to read Affymetrix CHP files
readClf                 Parsing a CLF file using Affymetrix Fusion SDK
readClfEnv              Parsing a CLF file using Affymetrix Fusion SDK
readClfHeader           Read the header of a CLF file.
readPgf                 Parsing a PGF file using Affymetrix Fusion SDK
readPgfEnv              Parsing a PGF file using Affymetrix Fusion SDK
readPgfHeader           Read the header of a PGF file into a list.
updateCel               Updates a CEL file
updateCelUnits          Updates a CEL file unit by unit
writeTpmap              Writes BPMAP and TPMAP files
