.median_normalize       Median normalization
%<>%                    Compound pipe
%>%                     Pipe
counts                  Big Papi counts matrix
gemini_boxplot          gemini_boxplot
gemini_calculate_lfc    Calculate log-fold change
gemini_create_input     gemini_create_input
gemini_inference        gemini_inference
gemini_initialize       gemini_initialize
gemini_parallelization
                        Parallelization in GEMINI
gemini_plot_mae         MAE plot
gemini_prepare_input    Prepare input before Model creation
gemini_score            Scoring Combination Effect
guide.annotation        Big Papi guide annotations
initialize_s            initialize_s
initialize_tau          initialize_tau
initialize_x            intialize_x
initialize_y            initialize_y
Input                   Input object from Big Papi
Model                   Model object from Big Papi
sample.replicate.annotation
                        Big Papi sample and replicate annotations
Sgene2Pguides_hash      Gene hashing
Sguide2Pguides_hash     Guide hashing
update_mae              update_mae
update_s_pb             update_s
update_tau_pb           update_tau_pb
update_x_pb             update_x_p
update_y_pb             update_y_pb
