deprecate               These functions will be deprecated. Please use
                        other functions instead.
getNeatOrder            Sorting by radial theta angle
mia-datasets            miaViz example data
mia-plot-args           Additional arguments for plotting
miaViz-package          miaViz - Microbiome Analysis Plotting and
                        Visualization
plotAbundance           Plotting abundance data
plotAbundanceDensity    Plot abundance density
plotBoxplot             Create boxplot of 'assay', 'rowData' or
                        'colData'.
plotCCA                 Plot RDA or CCA object
plotColGraph            Plotting igraph objects with information from a
                        'SummarizedExperiment'
plotColTile             Plot factor data as tiles
plotDMNFit              Plotting Dirichlet-Multinomial Mixture Model
                        data
plotForest              Visualize estimated results with forest plots
plotHistogram           Create histogram or barplot of 'assay',
                        'rowData' or 'colData'
plotLoadings            Plot feature loadings for
                        TreeSummarizedExperiment objects or feature
                        loadings numeric matrix.
plotMediation           Visualize mediation
plotNMDS                Wrapper for scater::plotReducedDim()
plotRowPrevalence       Plot prevalence information
plotRowTree             Plotting tree information enriched with
                        information
plotScree               Create a scree plot
plotSeries              Plot Series
rowTreeData             Adding information to tree data in
                        'TreeSummarizedExperiment'
