CDEResult               Constructor for CDEResult
CDEResult-class         CDEResult: Compound DE Result Container
compoundDE              Compound Differential Expression:
                        Transcriptional and Compositional Decomposition
deTable                 Accessor for the DE table in a CDEResult
filterGenesBySource     Filter DE Genes by Source Classification
plotDecomposition       Scatter Plot of Transcriptional vs
                        Compositional DE Scores
plotProportion          Stacked Bar Plot of Subtype Proportions per
                        Condition
plotTCRatio             Histogram of TC_ratio Distribution
scCompoundDE-package    scCompoundDE: Compositional and Transcriptional
                        Decomposition of Pseudo-Bulk Differential
                        Expression
show,CDEResult-method   Show method for CDEResult
subtypeDE               Accessor for per-subtype DE results in a
                        CDEResult
subtypeProportions      Accessor for subtype proportions in a CDEResult
tcRatio                 Accessor for TC_ratio vector in a CDEResult
