# Generated by roxygen2: do not edit by hand

S3method(getPeriodicity,DNAString)
S3method(getPeriodicity,DNAStringSet)
S3method(getPeriodicity,GRanges)
S3method(getPeriodicityWithIterations,DNAStringSet)
S3method(getPeriodicityWithIterations,GRanges)
S3method(plotAggregateCoverage,CompressedRleList)
S3method(plotAggregateCoverage,SimpleRleList)
S3method(plotAggregateCoverage,list)
export(getPeriodicity)
export(getPeriodicityTrack)
export(getPeriodicityWithIterations)
export(plotAggregateCoverage)
export(plotPeriodicityResults)
export(setUpBPPARAM)
export(theme_ggplot2)
import(BSgenome)
import(BiocParallel)
import(Biostrings)
import(Seqinfo)
import(GenomicRanges)
import(IRanges)
import(S4Vectors)
import(ggplot2)
import(magrittr)
importFrom(BSgenome,getBSgenome)
importFrom(cowplot,plot_grid)
importFrom(methods,as)
importFrom(methods,is)
importFrom(parallel,mclapply)
importFrom(rtracklayer,export.bw)
importFrom(stats,dist)
importFrom(stats,p.adjust)
importFrom(stats,qnorm)
importFrom(stats,qt)
importFrom(stats,setNames)
importFrom(stats,spectrum)
importFrom(zoo,rollmean)
