| data2LmpDataList | Converts data to a lmpDataList. |
| limpca | Linear modeling of high-dimensional designed data based on ASCA/APCA family of methods |
| lmpBootstrapTests | Tests the significance of model effects by bootstrap. |
| lmpContributions | Summary of the contributions of each effect |
| lmpEffectMatrices | Computes the effect matrices |
| lmpEffectPlot | Effect plot |
| lmpLoading1dPlot | Loadings represented on a line plot. |
| lmpLoading2dPlot | Loading plots on a 2D scatter plot |
| lmpModelMatrix | Creates the model matrix 'X' |
| lmpPcaEffects | PCA on the effect matrices |
| lmpScorePlot | Score plots of effect matrices |
| lmpScoreScatterPlotM | Scatterplot matrix of effect matrices scores |
| lmpScreePlot | Scree Plot |
| pcaBySvd | Singular Value Decomposition for PCA analysis |
| pcaLoading1dPlot | Loadings represented on a line plot. |
| pcaLoading2dPlot | Loading plots on a 2D scatter plot |
| pcaScorePlot | Score plots |
| pcaScreePlot | Scree Plot |
| plotDesign | Plot of the design matrix |
| plotLine | Line plot |
| plotMeans | Means plot |
| plotScatter | Scatter plot |
| plotScatterM | Scatter plot matrix |
| trout | trout: the Rainbow trouts transcriptomic dataset |
| UCH | UCH: the Urine Citrate-Hippurate metabolomic dataset |