94dfe786d6476283636d084a6246b5b1 *CITATION
dc00b5f2b3e0adbb8ac04ec1e7961c1d *DESCRIPTION
005ddc5be20850dfa05c4c38fa7421f9 *INDEX
7782297b0d1f73e190298e5f16c3840f *Meta/Rd.rds
cabef46ce664a588fb61108ec8c7e3d3 *Meta/data.rds
8bd78fe4d71c3aeb1a0f4982ee51622b *Meta/features.rds
0ea24987fd7534772d1145a2bd75fda0 *Meta/hsearch.rds
fd0ebc7193bd9c0e1210683a1cc45fbd *Meta/links.rds
995868f061bb17aa0022257cdbcdc531 *Meta/nsInfo.rds
db34e21d77b9c593b928e1c1ffc2d58b *Meta/package.rds
4f45b55f0465f3c7dc561a872f55ceac *Meta/vignette.rds
36cd5c3537100f06a71738c1b541f9c8 *NAMESPACE
54341a3c829bb8161d403f820c4cc0e0 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/GUIDEseq
6587bb3e7f8c6049033aa06d4cf287ad *R/GUIDEseq.rdb
c0c4f54fd17319ba36ce4375a7c68444 *R/GUIDEseq.rdx
0378cd0305c3d239fdcf7eb8aa32db92 *data/peaks.gr.rda
89b8ffe8526fd20df18dcc14e1df8ba3 *data/uniqueCleavageEvents.rda
861178614bf41184824997f50b65c815 *doc/GUIDEseq.R
06c3a9adc06921fcf46683e2f68740c5 *doc/GUIDEseq.Rmd
4903c62735b63765b971cdf207c44171 *doc/GUIDEseq.html
aabce33798e46e2198caf7dda1f1289c *doc/index.html
6d462cbcf8462e0618db482985b5dc07 *extdata/1450-PlusMinusPeaksMerged.bed
2d16d206663d3af40464747ff656df01 *extdata/1450-chr14-chr2-bulge-test.bed
970b5ab053ab03e33d43fba1b391db2b *extdata/1450.fa
6ae5cc03a9064b3b8c045974e6312493 *extdata/1450peakSeq.RDS
b0c7dfbde051e95b85ec0614fa4f34ea *extdata/InsertionInOfftarget.RDS
50297a8719b488896579a84003599b9e *extdata/NatureBiot2016SuppTable19DoenchRoot.xlsx
4be7161445eba0fb1efe41baf9801ce0 *extdata/OT71_Bulge_example.xlsx
b923ac992fe938c6932ce93899d61cc2 *extdata/PEtagAnalysis_testthat.RDS
9e99a4998da29c0001658021a5163246 *extdata/T2.fa
652b596e1a437cd3070bc7afb64c423f *extdata/T2plus100OffTargets.bed
66e1e37c8fcbad3c1449e64470a6dff4 *extdata/UMI-HEK293_site4_R1.txt
ce076916c5f6413f9a8d3ada640842d6 *extdata/UMI-HEK293_site4_chr13.txt
dd11b41829b142e2e342c1b218ff6d9a *extdata/UMI-testGetUmi.fastq
c8234ec0d8ba00da7a812b2cd3ebffb0 *extdata/alns.RDS
fda6af97d15bbce462989ce927afab3c *extdata/bowtie2.HEK293_site4.sort.bed
66bbe562e6f541fb3e18109943e4634f *extdata/bowtie2.HEK293_site4_chr13.sort.bam
b6b49683d0ad761767064a22b9220dfe *extdata/bowtie2.HEK293_site4_chr13.sort.bed
17ace7845a7843ed3b20e253f184e194 *extdata/cleavages_testthat.RDS
d098930d2fc4ffa443cab7f7f537dd27 *extdata/consecutiveDNABulge.RDS
7d8203570ded2c56bb3a6c1ab7cf382d *extdata/consecutiveDNABulge.bed
3cc607f608dd2f8fb641553e22b34be1 *extdata/consecutiveDNABulge2.RDS
e00a39c599e36b5edc6781b639d2f1c0 *extdata/forVisualization/mergedOffTargets.txt
bd7f52a41a93c4ae91673d151c4044aa *extdata/forVisualization/offTargetsInPeakRegions.xls
73a8dc03ae19de77802396c5adca3e93 *extdata/gRNA-PlusMinusPeaksMerged.bed
7f16701fa8d5ff205f1d1eaf57a2f000 *extdata/gRNA.fa
d73caa0b0f41bf4fc8a3f6e232e71ac2 *extdata/getUmi.pl
0d4bd203578b0450c15773995ba57a4a *extdata/p5.index
49f921d7e27b31032c29a9f7d960d212 *extdata/p7.index
966348620cea51b2c725c536742096e4 *extdata/pa.f.RDS
57df1ec44c80e9706f306f0b9a321c9b *extdata/pa.r.RDS
fdd87fb94baff601d388cf47d0a082f5 *extdata/sample1-17/offTargetsInPeakRegions.xls
94e47eb903856eec308dce7801baf1c8 *extdata/sample2-18/offTargetsInPeakRegions.xls
f502d2ebfaac264dd8982782083071d1 *extdata/sample3-19/offTargetsInPeakRegions.xls
d20361464e4c976c15ee66c4106dfddd *extdata/sample4-20/offTargetsInPeakRegions.xls
4ccbab642cde1950063994c71317d406 *extdata/sample5-21/offTargetsInPeakRegions.xls
1a7c311a1dc404e4581cb1b2d778145b *extdata/sample6-22/offTargetsInPeakRegions.xls
c7fc6e066b15b93c5349835045947ddc *extdata/sample7-23/offTargetsInPeakRegions.xls
c9aad645dfb7c07f9778c9cd961f7773 *extdata/subjects2.RDS
b9580f92a83bba82392585d328d52606 *extdata/testCFDscoringWithBulge.RDS
12097d993bfe37d33ba51cac7946a0c3 *extdata/testGetUmi/testGetUmi.fastq
cfd93742b1771fd018675c36d9f87c85 *extdata/testPeaks.rda
0dce18622a20f7c2155b17d356685844 *extdata/testbothRunSum.rda
d26ff84d4ab40e0a2b37c57fee197c0d *help/AnIndex
d3ee6304db6e5590e191519fc60858c0 *help/GUIDEseq.rdb
04da6b7cb3896dbd247c2c4952a9d0b3 *help/GUIDEseq.rdx
a66fb921799af13eea19f46233da3099 *help/aliases.rds
66370072fd849786907ea5c26e73cc97 *help/paths.rds
a8e08e5432f8bac386183073256a043d *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
