Weighted Sliced Inverse Regression (wSIR) for supervised dimension reduction of spatial transcriptomics and single cell gene expression data

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Documentation for package ‘wSIR’ version 0.99.9

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

Help Pages

exploreWSIRParams	exploreWSIRParams function
findTopGenes	findTopGenes
generateUmapFromWSIR	generateUmapfromWSIR
MouseData	Mouse Gastrulation Data
plotUmapFromWSIR	plotUmapFromWSIR
projectWSIR	projectWSIR
runwSIR	runwSIR
sample1_cell_types	Mouse Gastrulation Data
sample1_coords	Mouse Gastrulation Data
sample1_exprs	Mouse Gastrulation Data
sample2_cell_types	Mouse Gastrulation Data
sample2_coords	Mouse Gastrulation Data
sample2_exprs	Mouse Gastrulation Data
sample3_cell_types	Mouse Gastrulation Data
sample3_coords	Mouse Gastrulation Data
sample3_exprs	Mouse Gastrulation Data
visualiseWSIRDirections	visualiseWSIRDirections
wSIR	wSIR