Package: KEGGemUP
Title: Creating, Rendering, and Mapping Omics Data on KEGG Pathway
        Graphs
Version: 0.99.1
Authors@R: 
    c(
        person(
            given = "Edoardo", family = "Filippi", role = c("aut"),
            email = "edoardo.filippi@uni-mainz.de", comment = c(ORCID = "0009-0003-9858-0137")
        ),
        person(
            given = "Myriam", family = "Meineck", role = c("ctb"),
            email = "Myriam.Meineck@unimedizin-mainz.de", comment = c(ORCID = "0000-0002-3243-2540")
        ),
        person(
            given = "Paul", family = "Classen", role = c("ctb"),
            email = "classenp@uni-mainz.de", comment = c(ORCID = "0000-0002-9410-0525")
        ),
        person(
            given = "Julia", family = "Weinmann-Menke", role = c("fnd"),
            email = "Julia.Weinmann-Menke@unimedizin-mainz.de", comment = c(ORCID = "0000-0001-7344-8381")
        ),
        person(
            given = "Federico", family = "Marini", role = c("aut", "cre"), 
            email = "marinif@uni-mainz.de", comment = c(ORCID = "0000-0003-3252-7758")
        )
    )
Description: KEGGemUP retrieves and renders interactively KEGG pathway graphs.
    The retrieval makes full use of the caching functionality to avoid unnecessary
    download processes. The interactivity of the graph is warranted via the 
    visNetwork interface to the vis.js library, fully supporting bindings to be 
    used in Shiny for further operations.
License: MIT + file LICENSE
Encoding: UTF-8
VignetteBuilder: knitr
biocViews: Software, Pathways, KEGG, Network, Visualization,
        DifferentialExpression, GraphAndNetwork, Transcriptomics,
        Proteomics, Metabolomics, SystemsBiology
Roxygen: list(markdown = TRUE)
URL: https://github.com/imbeimainz/KEGGemUP
BugReports: https://github.com/imbeimainz/KEGGemUP/issues
Depends: R (>= 4.6.0)
Imports: BiocFileCache, httr2, ggplot2, rlang, methods, igraph, scales,
        KEGGREST, visNetwork, RColorBrewer, htmlwidgets, xml2,
        grDevices, stats, tools, utils
Suggests: knitr, rmarkdown, BiocStyle, testthat (>= 3.0.0)
Config/testthat/edition: 3
Config/roxygen2/version: 8.0.0
git_url: https://git.bioconductor.org/packages/KEGGemUP
git_branch: devel
git_last_commit: b905e7a
git_last_commit_date: 2026-06-10
Repository: Bioconductor 3.24
Date/Publication: 2026-06-11
NeedsCompilation: no
Packaged: 2026-06-11 22:30:39 UTC; biocbuild
Author: Edoardo Filippi [aut] (ORCID: <https://orcid.org/0009-0003-9858-0137>),
  Myriam Meineck [ctb] (ORCID: <https://orcid.org/0000-0002-3243-2540>),
  Paul Classen [ctb] (ORCID: <https://orcid.org/0000-0002-9410-0525>),
  Julia Weinmann-Menke [fnd] (ORCID:
    <https://orcid.org/0000-0001-7344-8381>),
  Federico Marini [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3252-7758>)
Maintainer: Federico Marini <marinif@uni-mainz.de>
