#chromosome	start	end	crest	length	tcnNbrOfLoci	tcnMean	tcnNbrOfSNPs	tcnNbrOfHets	dhNbrOfLoci	map	dhMax	cluster	neighbour	distDH	errorSNP	distTcn	errorLength	totalError	minStart	maxStart	minStop	maxStop	area	peaks	meanCovT	meanCovB	tcnMeanRaw	AF	BAF	dhMean	c1Mean	c2Mean	A	B	genotype	TCN	CNA.type
1	840009	4269982	NA	3429974	49752	1.92355540	49309	1950	10677	mappable	0.07240000	4	edge	0.003393360408	0.00041788550	0.03954567318	0.09212444	0.09254232	840009	840009	4269959	4270005	0.17004872	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
1	4269982	4310127	NA	40146	666	2.16958046	666	22	167	mappable	0.06580856	8	NA	0.002673081970	0.04545454545	0.05535432682	0.13077906	0.17623360	4269959	4270005	4309995	4310127	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
1	4310128	12839977	NA	8529851	121574	2.02648247	120860	5457	28603	mappable	0.06840530	1	self	0.000223889630	0.00016204829	0.00059606060	0.08686554	0.08702759	4310128	4310260	12839977	12839977	0.15751384	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
1	13780016	51809268	NA	38029259	468480	2.02648247	466607	19023	113764	mappable	0.06845000	1	NA	0.000464912487	0.00004785605	0.00140562814	0.07942620	0.07947406	13780016	13780016	51809268	51809268	0.14820354	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
1	51809269	51809538	CTX	270	8	2.19844021	8	0	4	mappable	NA	NA	NA	NA	Inf	0.07575432682	0.24762234	Inf	51809269	51809277	51809528	51809538	NA	missing	715347.10	NA	0.9570000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
1	51809539	51809639	CTX	101	1	2.19844021	1	0	1	mappable	NA	NA	NA	NA	Inf	0.07575432682	0.30038097	Inf	51809539	51809623	51809623	51809639	NA	missing	715347.10	NA	0.9570000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
1	51809640	51809886	CTX	247	4	2.19844021	4	0	1	mappable	NA	NA	NA	NA	Inf	0.07575432682	0.25162401	Inf	51809640	51809745	51809791	51809886	NA	missing	715347.10	NA	0.9570000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
1	51809887	72070033	CTX	20260148	278558	2.02648247	277424	12836	70209	mappable	0.06845000	1	NA	0.000295452994	0.00007158196	0.00179320009	0.08239899	0.08247057	51809887	51810122	72069918	72070033	0.13411122	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
1	72070034	72080005	NA	9972	145	2.21757124	145	0	37	mappable	NA	NA	NA	NA	Inf	0.08385432682	0.15056083	Inf	72070034	72070149	72079898	72080112	NA	missing	753266.70	NA	0.9651000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
1	72080005	74269967	NA	2189963	29529	2.02648247	29438	966	7912	mappable	0.06502500	1	NA	0.003456639592	0.00094607379	0.00665432682	0.09495560	0.09590168	72079898	72080112	74269781	74269967	0.14679496	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
1	74269968	74310009	NA	40042	560	2.11270485	560	0	134	mappable	NA	NA	NA	NA	Inf	0.03945432682	0.13081107	Inf	74269968	74270154	74309922	74310009	NA	missing	724898.81	NA	0.9207000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
1	74310010	86040013	NA	11730005	159065	2.02648247	158279	7252	41749	mappable	0.06876667	1	NA	0.000836376889	0.00012440906	0.00101646437	0.08516545	0.08528986	74310010	74310097	86039973	86040013	0.14714708	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
1	86040014	86050009	NA	9996	157	2.16958046	154	4	34	mappable	0.11669505	8	NA	0.039248765813	0.14285714286	0.06545432682	0.15052154	0.29337868	86040014	86040054	86049992	86050009	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
1	86050010	86080075	NA	30066	509	1.92355540	508	26	134	mappable	0.09902797	4	NA	0.027425140069	0.03703703704	0.05354567318	0.13444614	0.17148318	86050010	86050027	86079994	86080156	NA	missing	634797.79	33.2302685	0.8406149	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
1	86080075	120529963	NA	34449891	456770	2.02648247	455346	22820	117068	mappable	0.06845000	1	self	0.000016719548	0.00004124902	0.00130148048	0.07987860	0.07991985	86079994	86080156	120529963	120529963	0.13573196	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
1	121220004	121229986	NA	9983	177	2.02648247	176	10	44	mappable	0.03335063	1	self	0.023933538326	0.09090909091	0.03465432682	0.15054281	0.24145190	121220004	121220004	121229986	121229986	NA	missing	693452.99	35.7876681	0.8841938	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
1	144010127	144019970	NA	9844	155	2.38313732	86	0	22	mappable	NA	NA	NA	0.361316712056	0.01449275362	0.15395432682	0.15077238	0.16526513	144010127	144010127	144019970	144019970	NA	missing	2377364.00	NA	1.0352000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
1	144920087	145739956	NA	819870	6377	2.02648247	5784	130	1864	mappable	0.07245000	1	self	0.010306639592	0.00138312586	0.00754567318	0.10180689	0.10319002	144920087	144920087	145739956	145739956	0.15522869	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
1	146540101	147829895	NA	1289795	11686	2.02648247	11650	796	2953	mappable	0.06314286	1	self	0.006467005446	0.00120192308	0.00385432682	0.09852843	0.09973035	146540101	146540101	147829895	147829895	0.17922913	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
1	149815060	150115801	NA	300742	3243	2.14472948	3231	5	863	mappable	0.04210354	7	NA	0.086586007467	0.05882352941	0.01865432682	0.10990118	0.16872471	149815060	149815060	150115777	150115801	NA	missing	712108.32	38.4491405	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
1	150115802	150119982	CTX	4181	53	2.14472948	52	0	18	mappable	NA	7	NA	0.143639572529	1.00000000000	0.09785432682	0.16625612	1.16625612	150115802	150115974	150119941	150120023	NA	missing	712108.32	NA	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
1	150119982	164380012	NA	14260031	175166	2.96483474	174510	6894	44358	mappable	0.32423870	3	NA	0.256843360408	0.00013245033	0.42845432682	0.08415570	0.08428815	150119941	150120023	164379979	164380012	0.94063193	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	164380013	164419969	NA	39957	590	3.09211372	590	3	167	mappable	0.25872193	9	NA	0.190240285542	0.33333333333	0.48465432682	0.13083730	0.46417063	164380013	164380046	164419828	164420110	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	164419969	175390019	NA	10970052	148735	2.96483474	148129	7811	37950	mappable	0.32915000	3	NA	0.261044012371	0.00011880718	0.42395181161	0.08551735	0.08563616	164419828	164420110	175389957	175390081	0.94762395	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	175390019	175404977	NA	14959	170	2.78630608	170	5	37	mappable	0.12945727	NA	NA	0.060975625854	0.20000000000	0.32465432682	0.14420935	0.34420935	175389957	175390081	175399952	175404977	NA	missing	991076.70	57.9056049	1.2059000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	175404978	175429982	NA	25005	339	3.09211372	339	9	80	mappable	0.27143193	9	NA	0.202950293181	0.11111111111	0.45225432682	0.13689320	0.24800432	175404978	175410003	175429915	175429982	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	175429983	179609970	NA	4179988	55792	2.96483474	55588	3001	14068	mappable	0.32190000	3	NA	0.253478635314	0.00031201248	0.42271256814	0.09092948	0.09124149	175429983	175430050	179609882	179610058	0.96423141	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	179609970	179619924	NA	9955	144	3.25867722	143	0	32	mappable	NA	NA	NA	0.011518360408	1.00000000000	0.52465432682	0.15058874	1.15058874	179609882	179610058	179619833	179619924	NA	missing	1087944.00	NA	1.4059000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	179619925	180639985	NA	1020061	13853	2.96483474	13806	939	3539	mappable	0.31859741	3	NA	0.250711217551	0.00101419878	0.42835432682	0.10019928	0.10121348	179619925	179620016	180639948	180640022	0.91093171	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	180639985	180710003	NA	70019	915	3.09211372	911	44	218	mappable	0.32806296	9	NA	0.248518360408	0.02083333333	0.51285432682	0.12425865	0.14509198	180639948	180640022	180709987	180710003	0.98873438	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
1	180710004	181679861	NA	969858	13234	2.96483474	13197	660	3300	mappable	0.31723352	3	NA	0.248751876892	0.00143472023	0.40075432682	0.10056612	0.10200084	180710004	180710020	181679695	181679861	0.97679912	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	181679862	181699969	NA	20108	315	3.09211372	314	13	82	mappable	0.27189091	9	NA	0.208481996772	0.07142857143	0.45875432682	0.13990434	0.21133291	181679862	181680028	181699932	181700006	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	181699969	194510039	NA	12810071	184028	2.96483474	183317	10570	47630	mappable	0.32730000	3	NA	0.259176198458	0.00008864462	0.41566597885	0.08470709	0.08479573	181699932	181700006	194509993	194510039	0.94310047	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	194510040	194520022	NA	9983	161	3.26009433	144	0	45	mappable	NA	NA	NA	0.312343261594	0.05882352941	0.52525432682	0.15054281	0.20936634	194510040	194510086	194519923	194520121	NA	missing	1048034.00	NA	1.4065000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	194520022	201429994	NA	6909973	95346	2.96483474	95003	5061	24673	mappable	0.32806711	3	NA	0.257176011108	0.00018504811	0.41765444953	0.08802721	0.08821225	194519923	194520121	201429934	201430054	0.95292535	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	201429994	201449984	NA	19991	320	3.09211372	320	15	75	mappable	0.28650653	9	NA	0.218024889389	0.06666666667	0.47715432682	0.13998678	0.20665345	201429934	201430054	201449940	201449984	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	201449985	205629909	NA	4179925	54041	2.96483474	53784	3017	12500	mappable	0.32304038	3	NA	0.252543360408	0.00030543677	0.40745432682	0.09092957	0.09123500	201449985	201450029	205629815	205629909	0.92940401	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	205629910	205670057	NA	40148	517	3.09211372	517	3	117	mappable	0.35564846	9	NA	0.287166815786	0.33333333333	0.50455432682	0.13077844	0.46411177	205629910	205630004	205669950	205670164	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	205670057	220199977	NA	14529921	196444	2.96483474	195763	8374	50123	mappable	0.32067500	3	NA	0.253418360408	0.00011043622	0.41355432682	0.08406002	0.08417046	205669950	205670164	220199934	220199977	0.94099490	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	220199978	220319905	NA	119928	1269	3.09211372	1259	107	320	mappable	0.30576201	9	NA	0.237280373395	0.00854700855	0.47635432682	0.11854093	0.12708794	220199978	220200021	220319777	220319905	0.95159778	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
1	220319906	225210010	NA	4890105	62164	2.96483474	61892	2700	15738	mappable	0.31431014	3	NA	0.246568360408	0.00033647376	0.40845432682	0.09000319	0.09033967	220319906	220320034	225209950	225210070	0.92142527	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	225210010	225490058	NA	280049	2772	3.09211372	2770	5	784	mappable	0.12006170	9	NA	0.249362515483	0.14285714286	0.50965432682	0.11052582	0.25338296	225209950	225210070	225489965	225490151	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	225490058	231899988	NA	6409931	87580	2.96483474	87198	4318	21731	mappable	0.31536496	3	NA	0.246568360408	0.00021276596	0.40865432682	0.08844909	0.08866186	225489965	225490151	231899958	231899988	0.94906754	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	231899989	231965045	NA	65057	945	3.27544639	942	19	229	mappable	0.26586785	NA	NA	0.190989368811	0.04545454545	0.53175432682	0.12508274	0.17053728	231899989	231900019	231959920	231970170	NA	missing	1037025.38	66.4060109	1.4130000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	231965045	234740055	NA	2775011	43261	2.96483474	43135	1553	11014	mappable	0.32002149	3	NA	0.252714788979	0.00059559261	0.41595432682	0.09344021	0.09403580	231959920	231970170	234739995	234740055	0.93882661	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	234740056	234749983	NA	9928	148	3.29410505	141	0	30	mappable	NA	NA	NA	0.328550905641	0.14285714286	0.53965432682	0.15063318	0.29349032	234740056	234740116	234749963	234749983	NA	missing	877432.00	NA	1.4209000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	234749984	235170030	NA	420047	6115	2.96483474	6083	402	1454	mappable	0.33261703	3	NA	0.264441747505	0.00230414747	0.39555432682	0.10706529	0.10936943	234749984	234750004	235169996	235170030	0.88043839	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	235170031	235634979	NA	464949	4258	3.09211372	4213	337	1047	mappable	0.31238269	9	NA	0.240482313896	0.00261780105	0.47595432682	0.10623203	0.10884983	235170031	235170065	235629955	235640003	0.95196191	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
1	235634979	235709953	NA	74975	865	2.96483474	865	1	223	mappable	0.37634409	3	NA	0.307862446430	1.00000000000	0.39865432682	0.12350160	1.12350160	235629955	235640003	235709875	235709953	NA	missing	1004421.01	66.2942800	1.2814883	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	235709954	242198642	NA	6488691	101298	3.09211372	100859	5844	25324	mappable	0.31847500	9	NA	0.248049700357	0.00015918497	0.44285890341	0.08838023	0.08853941	235709954	235710032	242198600	242198684	0.92650051	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
1	242198642	246830003	NA	4631362	62671	2.96483474	62358	2132	15610	mappable	0.32351429	3	NA	0.253418360408	0.00040899796	0.43105432682	0.09032198	0.09073098	242198600	242198684	246829990	246830003	0.93645769	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
1	246830004	246859978	NA	29975	588	3.29693928	585	2	137	mappable	0.28284528	NA	NA	0.219425671729	0.20000000000	0.54085432682	0.13448568	0.33448568	246830004	246830017	246859893	246859978	NA	missing	1029548.25	64.0553838	1.4221000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
1	246859979	248819497	NA	1959519	24254	2.96483474	24110	1238	5710	mappable	0.32058529	3	edge	0.251343360408	0.00072358900	0.41325432682	0.09568431	0.09640790	246859979	246860064	248798862	248819497	0.93599496	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
10	130013	6926184	NA	6796173	120294	2.16958046	119371	5680	28732	mappable	0.06709643	8	edge	0.002517732327	0.00015146925	0.13562804537	0.08812012	0.08827159	130013	130013	6926178	6926184	0.22234060	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	6926185	6926193	DUP	9	0	0.00000000	0	0	NA	mappable	NA	NA	NA	NA	Inf	0.88124567318	0.63092975	Inf	6926185	6926185	6926193	6926193	NA	missing	NA	NA	0.0000000	NA	NA	0.00000000	0.000000000	0.0000000	0	0	NA	0	HomoDel
10	6926194	6926620	DUP	427	7	3.01824031	5	0	1	mappable	NA	NA	NA	0.170000078723	0.50000000000	0.42285432682	0.22888291	0.72888291	6926194	6926250	6926609	6926620	NA	missing	1021521.40	NA	1.3041000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
10	6926621	6942497	ITX	15877	299	3.09211372	296	34	79	mappable	0.27769380	9	NA	0.204399644501	0.02702702703	0.49725432682	0.14332139	0.17034842	6926621	6926647	6942453	6942497	0.98340083	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
10	6942498	35813751	DUP	28871255	430694	2.37454371	428978	20677	108914	mappable	0.06502500	NA	NA	0.003374629074	0.00004465681	0.15031586494	0.08070006	0.08074471	6942498	6942503	35813549	35813751	0.20776005	1	806575.09	41.9861004	1.0315615	NA	NA	0.00000000	1.187271854	1.1872719	1	1	1:1	2	NA
10	35813752	39149984	CTX	3336233	35069	2.16958046	34630	1434	9004	mappable	0.06798804	8	NA	0.000853116506	0.00053390283	0.08085432682	0.09229439	0.09282830	35813752	35814052	39149984	39149984	0.23762909	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	42410000	46159967	NA	3749968	43642	2.16958046	43448	2338	11002	mappable	0.06863061	8	NA	0.001283476784	0.00039494471	0.05362710992	0.09158160	0.09197655	42410000	42410000	46159967	46159967	0.25211749	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	48310177	48659961	NA	349785	5572	2.02648247	5557	228	1363	mappable	0.07480259	1	self	0.006818360408	0.00411522634	0.01884567318	0.10860057	0.11271580	48310177	48310177	48659961	48659961	0.21217873	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
10	49390096	55739973	NA	6349878	83046	2.02648247	82710	4225	21065	mappable	0.06528404	1	self	0.000031639592	0.00021925016	0.01275432682	0.08850224	0.08872149	49390096	49390096	55739912	55740034	0.16557463	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
10	55739973	58710008	NA	2970037	43408	2.16958046	43190	3101	11031	mappable	0.06654038	8	NA	0.000111672738	0.00030129557	0.05397686644	0.09301439	0.09331568	55739912	55740034	58709983	58710033	0.17956519	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	58710008	58728000	NA	17993	321	2.23575753	321	0	81	mappable	NA	NA	NA	NA	Inf	0.09155432682	0.14149127	Inf	58709983	58710033	58727989	58728000	NA	missing	759530.49	NA	0.9728000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
10	58728001	62700020	NA	3972020	58523	2.16958046	58350	3049	15351	mappable	0.06723289	8	NA	0.000031639592	0.00031036623	0.05755432682	0.09123488	0.09154524	58728001	58728012	62699994	62700046	0.16722025	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	62700020	62709955	NA	9936	142	2.14472948	141	0	36	mappable	NA	7	NA	0.115728886724	1.00000000000	0.01054567318	0.15062000	1.15062000	62699994	62700046	62709907	62710003	NA	missing	712108.32	NA	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
10	62709955	70228366	NA	7518413	106845	2.16958046	106526	4728	27841	mappable	0.06655000	8	NA	0.002691131676	0.00019817677	0.06105871823	0.08755802	0.08775620	62709907	62710003	70219819	70228366	0.18444452	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	70228367	70248993	ITX	20627	355	1.03231837	355	43	82	mappable	0.94862500	2	NA	0.880143360408	0.02325581395	0.36304567318	0.13954547	0.16280128	70228367	70230124	70248895	70248993	1.00000000	2	361163.57	34.9893961	0.4632688	34.02873	0.9968863	0.99377256	0.003214349	1.0291040	1	0	1:0	1	DEL;LOH
10	70248994	70249378	DEL	385	6	1.17103299	6	0	1	mappable	NA	NA	NA	NA	Inf	0.35924567318	0.23286372	Inf	70248994	70249094	70249365	70249378	NA	missing	410998.00	NA	0.5220000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DEL
10	70249379	70250028	ITX	650	9	1.17103299	8	0	2	mappable	NA	NA	NA	0.025003378722	1.00000000000	0.35924567318	0.21403432	1.21403432	70249379	70249530	70249923	70250028	NA	missing	410998.00	NA	0.5220000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DEL
10	70250029	81109971	NA	10859943	149206	2.16958046	148765	5182	37297	mappable	0.06639167	8	NA	0.000035027075	0.00017784101	0.04645432682	0.08557060	0.08574844	70250029	70250134	81109864	81109971	0.16818878	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	81109972	81140069	NA	30098	480	1.92355540	476	28	118	mappable	0.07530455	4	NA	0.010036542226	0.03125000000	0.03544567318	0.13443227	0.16568227	81109972	81110079	81139953	81140185	NA	missing	634797.79	33.2302685	0.8406149	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
10	81140069	83240016	NA	2099948	24238	2.16958046	24142	1539	6168	mappable	0.06985242	8	NA	0.001105860408	0.00061162080	0.06295432682	0.09522938	0.09584100	81139953	81140185	83239934	83240098	0.16094623	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	83240016	83260083	NA	20068	334	2.34109629	334	0	98	mappable	NA	NA	NA	NA	Inf	0.13615432682	0.13993246	Inf	83239934	83240098	83259973	83260193	NA	missing	782174.05	NA	1.0174000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
10	83260083	91749990	NA	8489908	116849	2.16958046	116479	6390	29860	mappable	0.07038056	8	NA	0.003393360408	0.00014792899	0.05515432682	0.08689110	0.08703903	83259973	83260193	91749965	91749990	0.16845561	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	91749991	92570017	NA	820028	11693	2.02648247	11657	999	2954	mappable	0.07024167	1	self	0.000477095768	0.00096618357	0.05520012345	0.10180545	0.10277163	91749991	91750016	92569973	92570017	0.14632398	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
10	92570018	100229918	NA	7659901	97433	2.16958046	97046	4963	24194	mappable	0.06947500	8	NA	0.000031639592	0.00018691589	0.05605432682	0.08745504	0.08764195	92570018	92570062	100229816	100229918	0.18453915	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	100229919	100239983	NA	10065	134	1.92355540	133	28	32	mappable	0.12814534	4	NA	0.061393784137	0.03448275862	0.02384567318	0.15040919	0.18489195	100229919	100230021	100239955	100240011	NA	missing	634797.79	33.2302685	0.8406149	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
10	100239983	103568099	NA	3328117	39925	2.16958046	39744	1629	9890	mappable	0.07001667	8	NA	0.003393360408	0.00055248619	0.05805432682	0.09230936	0.09286185	100239955	100240011	103567876	103568099	0.16541262	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	103568100	103568426	ITX	327	2	1.84321711	2	0	2	mappable	NA	NA	NA	NA	Inf	0.07464567318	0.23943072	Inf	103568100	103568376	103568384	103568426	NA	missing	630601.70	NA	0.8066000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
10	103568427	103734372	DEL	165946	1695	1.03231837	1683	19	437	mappable	0.98325000	2	NA	0.907703037827	0.03225806452	0.35534567318	0.11533790	0.14759596	103568427	103568544	103734355	103734372	NA	missing	361163.57	34.9893961	0.4632688	NA	NA	NA	NA	NA	NA	NA	NA	NA	DEL
10	103734373	108340001	DEL	4605629	57738	2.16958046	57543	2393	14409	mappable	0.06647105	8	NA	0.001129716515	0.00038639876	0.05555432682	0.09035478	0.09074118	103734373	103734389	108339958	108340044	0.14184008	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	108340001	108379989	NA	39989	606	2.02648247	605	24	149	mappable	0.07093629	1	self	0.002454650731	0.04000000000	0.00524567318	0.13082742	0.17082742	108339958	108340044	108379958	108379989	NA	missing	693452.99	35.7876681	0.8841938	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
10	108379990	118109308	NA	9729319	148294	2.16958046	147780	6465	37859	mappable	0.06835962	8	NA	0.000682556901	0.00014328700	0.05713256869	0.08615525	0.08629854	108379990	108380021	118109282	118109308	0.18146045	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	118109309	118118346	ITX	9038	104	3.48919433	104	0	24	mappable	NA	NA	NA	NA	Inf	0.62225432682	0.15218629	Inf	118109309	118109433	118118340	118118346	NA	missing	1194392.14	NA	1.5035000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
10	118118347	118124883	INV	6537	90	3.50856155	90	1	30	mappable	0.64539007	NA	NA	0.576908431330	1.00000000000	0.63045432682	0.15779824	1.15779824	118118347	118118600	118124871	118124883	NA	missing	1198469.39	98.5974816	1.5117000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
10	118124884	118126956	INV	2073	28	3.47549557	28	0	6	mappable	NA	NA	NA	NA	Inf	0.61645432682	0.18152931	Inf	118124884	118125116	118126930	118126956	NA	missing	1186463.30	NA	1.4977000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
10	118126957	118127138	ITX	182	3	3.47549557	3	0	0	mappable	NA	NA	NA	NA	Inf	0.61645432682	0.26638981	Inf	118126957	118126971	118127052	118127138	NA	missing	1186463.30	NA	1.4977000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
10	118127139	118127843	DUP	705	6	3.47549557	6	0	3	mappable	NA	NA	NA	NA	Inf	0.61645432682	0.21138343	Inf	118127139	118127160	118127790	118127843	NA	missing	1186463.30	NA	1.4977000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
10	118127844	129500013	INV	11372172	167854	2.16958046	167173	7841	40906	mappable	0.06845000	8	NA	0.001745273644	0.00011734335	0.04674134768	0.08532786	0.08544520	118127844	118127931	129499875	129500013	0.16939268	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
10	129500014	129509991	NA	9978	210	1.92355540	209	1	60	mappable	0.14754098	4	NA	0.005288852211	0.50000000000	0.03744567318	0.15055100	0.65055100	129500014	129500152	129509974	129509991	NA	missing	634797.79	33.2302685	0.8406149	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
10	129509992	135439925	NA	5929936	102872	2.02648247	102049	5881	23851	mappable	0.06845000	1	edge	0.000415368011	0.00014918693	0.01521851338	0.08889053	0.08903971	129509992	129510009	135439925	135439925	0.19996393	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
11	190010	1969990	NA	1779982	25153	2.96483474	24854	1512	5231	mappable	0.32963676	3	edge	0.260261957924	0.00055218112	0.40371872470	0.09632319	0.09687537	190010	190010	1969967	1970013	0.93127904	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
11	1969990	2060038	NA	90049	1538	3.09211372	1531	112	326	mappable	0.33674090	9	NA	0.270211402272	0.00840336134	0.43235432682	0.12151833	0.12992169	1969967	1970013	2059997	2060038	0.91765635	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
11	2060039	2109915	NA	49877	786	2.75631052	786	47	190	mappable	0.34389968	NA	NA	0.275418041810	0.02127659574	0.31195432682	0.12815512	0.14943172	2060039	2060080	2109806	2109915	0.97175522	2	884261.61	58.6673568	1.1932000	32.34763	0.6671299	0.33425971	0.917493477	1.8388170	2	1	2:1	3	DUP
11	2109916	2239996	NA	130081	2257	3.09211372	2239	110	443	mappable	0.37387329	9	NA	0.307876480066	0.00781250000	0.42475432682	0.11772288	0.12553538	2109916	2110025	2239986	2239996	0.91842299	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
11	2239997	3520037	NA	1280042	18525	2.96483474	18384	1298	4131	mappable	0.33467911	3	NA	0.267111831233	0.00069492703	0.37886441589	0.09858161	0.09927654	2239997	2240007	3409994	3630080	0.94793762	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
11	3520037	5420047	NA	1900011	28462	3.09211372	28261	1478	7136	mappable	0.33737500	9	NA	0.265565159546	0.00059559261	0.45616379558	0.09588842	0.09648401	3409994	3630080	5419946	5420148	0.94062973	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
11	5420047	22140009	NA	16719963	238933	2.96483474	237925	12736	59500	mappable	0.33300000	3	NA	0.264520708889	0.00007275902	0.42729295648	0.08335046	0.08342322	5419946	5420148	22139977	22140009	0.94387797	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
11	22140010	22160033	NA	20024	360	3.09211372	360	37	86	mappable	0.31725973	9	NA	0.248778093532	0.02702702703	0.48795432682	0.13996347	0.16699050	22140010	22140042	22159901	22160165	0.93184573	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
11	22160033	31819351	NA	9659319	140692	2.96483474	140013	6883	36454	mappable	0.32532500	3	NA	0.256843360408	0.00013224015	0.42815432682	0.08619393	0.08632617	22159901	22160165	31819335	31819351	0.96021795	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
11	31819352	33390027	NA	1570676	20812	3.09211372	20689	1299	5259	mappable	0.34094613	9	NA	0.274311397991	0.00070323488	0.43866146693	0.09716778	0.09787102	31819352	31819368	33389975	33390027	0.96656741	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
11	33390028	33400047	NA	10020	129	3.51800921	129	16	29	mappable	0.45095722	6	NA	0.382475582221	0.06250000000	0.64845432682	0.15048235	0.21298235	33390028	33390080	33399991	33400103	NA	missing	1191338.36	89.0097562	1.5157001	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
11	33400047	37119733	NA	3719687	57417	2.96483474	57184	2943	13985	mappable	0.33240000	3	NA	0.263693360408	0.00031486146	0.42415432682	0.09163068	0.09194554	33399991	33400103	37119730	37119733	0.96126759	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
11	37119734	48351085	CTX	11231354	156803	2.96483474	156266	6680	40036	mappable	0.32863056	3	NA	0.262691335294	0.00013856173	0.42892539816	0.08539335	0.08553191	37119734	37119871	48351078	48351085	0.95114913	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
11	48351086	48899996	NA	548912	3715	3.09211372	3706	19	215	mappable	0.36703406	9	NA	0.299560862376	0.03571428571	0.51435432682	0.10489759	0.14061187	48351086	48351093	48899996	48899996	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
11	48899997	50170092	NA	1270096	0	0.00000000	0	0	NA	mappable	NA	NA	NA	NA	Inf	0.88124567318	0.09863632	Inf	48899997	48899997	50170092	50170092	NA	missing	NA	NA	0.0000000	NA	NA	0.00000000	0.000000000	0.0000000	0	0	NA	0	HomoDel
11	50170093	50660091	NA	490000	9505	3.09211372	9466	738	2766	mappable	0.31537572	9	NA	0.244931737441	0.00128700129	0.44662027106	0.10580655	0.10709355	50170093	50170093	50649997	50660091	0.94768491	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
11	51340026	51579984	NA	239959	1730	3.32953289	1705	11	538	mappable	0.29341190	NA	NA	0.227203453147	0.02777777778	0.55465432682	0.11190421	0.13968199	51340026	51340061	51579984	51579984	NA	missing	1153371.81	76.2559872	1.4359000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
11	54792817	55310049	NA	517234	9394	3.09211372	9375	207	2780	mappable	0.32672424	9	NA	0.254182189672	0.00442477876	0.45911228935	0.10537154	0.10979632	54792817	54792817	55309991	55310107	0.98189155	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
11	55310049	69390026	NA	14079978	172118	2.96483474	171370	5805	42161	mappable	0.32578462	3	NA	0.256843360408	0.00015260186	0.42055432682	0.08422066	0.08437326	55309991	55310107	69389969	69390026	0.95029135	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
11	69390027	69435029	NA	45003	732	2.71828464	732	1	204	mappable	0.09090909	NA	NA	0.022427451317	1.00000000000	0.29585432682	0.12938507	1.12938507	69390027	69390084	69429994	69440064	NA	missing	920047.16	50.1843908	1.1771000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
11	69435029	73295002	NA	3859974	48546	2.96483474	48377	1759	11425	mappable	0.33106268	3	NA	0.263693360408	0.00051867220	0.40215432682	0.09140701	0.09192568	69429994	69440064	73289993	73300011	0.95504340	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
11	73295002	73604950	NA	309949	3218	3.09211372	3214	22	833	mappable	0.29165121	9	NA	0.229658250223	0.03846153846	0.50985432682	0.10963908	0.14810062	73289993	73300011	73599823	73604950	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
11	73604951	78073427	NA	4468477	59249	2.96483474	58963	2877	14491	mappable	0.32532500	3	NA	0.256843360408	0.00031615555	0.41965432682	0.09053317	0.09084932	73604951	73610078	78073423	78073427	0.96113439	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
11	78073428	78079947	CTX	6520	86	2.04515577	86	5	29	mappable	0.91086717	NA	NA	0.842385526307	0.20000000000	0.01085432682	0.15784502	0.35784502	78073428	78073475	78079853	78080041	NA	missing	696868.60	66.2025170	0.8921000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
11	78079947	89349940	NA	11269994	162491	1.03231837	161977	7100	41932	mappable	0.94182500	2	NA	0.873343360408	0.00013133701	0.42224567318	0.08537528	0.08550662	78079853	78080041	89349940	89349940	0.95457652	2	361163.57	34.9893961	0.4632688	34.02873	0.9968863	0.99377256	0.003214349	1.0291040	1	0	1:0	1	DEL;LOH
11	89850037	134939862	NA	45089834	664940	1.03231837	662436	31154	167845	mappable	0.94525000	2	edge	0.875432075520	0.00002971592	0.42374136858	0.07865872	0.07868843	89850037	89850037	134939862	134939862	0.96193928	2	361163.57	34.9893961	0.4632688	34.02873	0.9968863	0.99377256	0.003214349	1.0291040	1	0	1:0	1	DEL;LOH
12	160107	3849991	NA	3689885	56391	2.96483474	55991	2600	13524	mappable	0.32464452	3	edge	0.256843360408	0.00033333333	0.41415432682	0.09167943	0.09201276	160107	160107	3849973	3849991	0.91270312	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	3849992	3890035	NA	40044	698	3.22206845	689	0	176	mappable	NA	NA	NA	0.111930764988	0.11111111111	0.50915432682	0.13081045	0.24192156	3849992	3850010	3889982	3890088	NA	missing	1042652.54	NA	1.3904000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	3890035	4960008	NA	1069974	15860	2.96483474	15780	881	3895	mappable	0.32427684	3	NA	0.255900503265	0.00104058273	0.43045432682	0.09985449	0.10089507	3889982	3890088	4959993	4960023	0.94337643	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	4960008	4969981	NA	9974	137	3.36897588	137	0	36	mappable	NA	NA	NA	NA	Inf	0.57135432682	0.15055755	Inf	4959993	4960023	4969943	4970019	NA	missing	1017255.60	NA	1.4526000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	4969981	6019979	NA	1049999	16347	2.96483474	16269	917	4023	mappable	0.33175644	3	NA	0.264734038374	0.00100502513	0.39005432682	0.09999022	0.10099524	4969943	4970019	6019936	6019979	0.93224850	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	6019980	8189948	NA	2169970	23022	3.09211372	22848	1382	5462	mappable	0.32052079	9	NA	0.247517066606	0.00064267352	0.44594181705	0.09501529	0.09565796	6019980	6020023	8189880	8189948	0.92577306	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
12	8189949	19410074	NA	11220126	148822	2.96483474	148261	5996	38196	mappable	0.31731250	3	NA	0.249729748330	0.00015250877	0.42222314930	0.08539861	0.08555112	8189949	8190017	19409977	19410171	0.95229528	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	19410074	21210002	NA	1799929	27280	3.09211372	27154	1619	6915	mappable	0.31980887	9	NA	0.249645997607	0.00057306590	0.44081687814	0.09624867	0.09682173	19409977	19410171	21209991	21210013	0.89068657	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
12	21210002	34819969	NA	13609970	189283	2.96483474	188490	10387	48502	mappable	0.32446731	3	NA	0.255012571809	0.00008944544	0.41079547156	0.08439474	0.08448418	21209991	21210013	34819969	34819969	0.94873678	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	38000003	38089984	NA	89982	3584	2.96483474	3492	25	1225	mappable	0.33155890	3	NA	0.222043280609	0.00854700855	0.41735432682	0.12152626	0.13007327	38000003	38000003	38089967	38090001	NA	missing	1004421.01	66.2942800	1.2814883	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	38089984	38139985	NA	50002	1752	3.09211372	1712	12	611	mappable	0.37997210	9	NA	0.241866339552	0.01923076923	0.50455432682	0.12812548	0.14735624	38089967	38090001	38139970	38140000	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	38139985	41387611	NA	3247628	48901	2.96483474	48684	2892	13204	mappable	0.33560000	3	NA	0.265442994343	0.00032164683	0.41333664211	0.09246009	0.09278173	38139970	38140000	41387519	41387611	0.97506460	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	41387612	41396535	CTX	8924	122	3.51800921	112	0	38	mappable	NA	6	NA	0.403217553956	0.10000000000	0.67915432682	0.15239866	0.25239866	41387612	41387655	41396516	41396535	NA	missing	1191338.36	NA	1.5157001	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	41396536	41396877	ITX	342	15	3.74214907	15	0	3	mappable	NA	NA	NA	NA	Inf	0.72935432682	0.23759029	Inf	41396536	41396551	41396877	41396877	NA	missing	1274723.80	NA	1.6106000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	41396878	54110001	DEL	12713124	161474	2.96483474	160799	7810	40592	mappable	0.33346136	3	NA	0.263693360408	0.00011786893	0.40995432682	0.08474643	0.08486430	41396878	41396914	54109980	54110022	0.95879641	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	54110001	54130002	NA	20002	295	2.78772320	295	0	100	mappable	NA	NA	NA	NA	Inf	0.32525432682	0.13997901	Inf	54109980	54110022	54129928	54130002	NA	missing	944809.07	NA	1.2065000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	54130003	58100017	NA	3970015	43717	2.96483474	43532	1538	11140	mappable	0.32461429	3	NA	0.254953654526	0.00058038305	0.41415432682	0.09123791	0.09181829	54130003	54130077	58099976	58100058	0.94702129	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	58100017	58150055	NA	50039	693	3.09211372	693	9	169	mappable	0.38217034	9	NA	0.313688697258	0.11111111111	0.48345432682	0.12811672	0.23922783	58099976	58100058	58149964	58150146	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	58150055	62120020	NA	3969966	56343	2.96483474	56102	2962	14596	mappable	0.34324525	3	NA	0.274168360408	0.00031220731	0.41415432682	0.09123798	0.09155019	58149964	58150146	62119937	62120103	0.95368489	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	62120020	62129949	NA	9930	151	3.25773247	147	19	33	mappable	0.40213182	NA	NA	0.347963814953	0.04347826087	0.52425432682	0.15062988	0.19410814	62119937	62120103	62129899	62129949	NA	missing	1038418.30	71.2640010	1.4055000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	62129950	69499995	NA	7370046	96362	2.96483474	96088	4149	24985	mappable	0.33581875	3	NA	0.267118360408	0.00022609089	0.39895432682	0.08766838	0.08789447	62129950	62130000	69499899	69499995	0.95108308	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	69499996	69509921	NA	9926	224	3.09211372	216	34	39	mappable	0.36295026	9	NA	0.305136564292	0.02380952381	0.49895432682	0.15063648	0.17444600	69499996	69500092	69509795	69510047	0.99757446	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
12	69509921	87307161	NA	17797241	243694	2.96483474	242902	9823	64080	mappable	0.33902500	3	NA	0.270543360408	0.00009420631	0.40455432682	0.08303872	0.08313292	69509795	69510047	87307078	87307161	0.96233855	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	87307162	87332293	CTX	25132	205	3.85740763	205	0	60	mappable	NA	NA	NA	NA	Inf	0.77815432682	0.13682476	Inf	87307162	87307270	87329896	87332293	NA	missing	1342260.47	NA	1.6594000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	87332294	105757978	CTX	18425686	252883	2.96483474	251846	12678	64709	mappable	0.33776461	3	NA	0.269429810035	0.00007291287	0.40234385834	0.08286647	0.08293938	87332294	87340087	105757928	105757978	0.95419831	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	105757979	105764178	DEL	6200	86	3.32433680	71	0	26	mappable	NA	NA	NA	0.474610878261	0.06666666667	0.55245432682	0.15875470	0.22542136	105757979	105757994	105764172	105764178	NA	missing	1145615.46	NA	1.4337000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	105764179	118409965	CTX	12645788	173613	2.96483474	172829	7863	43102	mappable	0.33683421	3	NA	0.267012088310	0.00011564705	0.40764879555	0.08477395	0.08488959	105764179	105764228	118409923	118409965	0.93541978	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	118409966	118420066	NA	10101	179	3.29103464	179	1	34	mappable	0.09909910	NA	NA	0.030617459507	1.00000000000	0.53835432682	0.15035095	1.15035095	118409966	118410008	118419998	118420066	NA	missing	1051628.00	57.7921694	1.4196000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	118420067	121330004	NA	2909938	35879	2.96483474	35732	1575	8905	mappable	0.33627500	3	NA	0.268687478055	0.00058072009	0.41885432682	0.09314214	0.09372286	118420067	118420135	121329978	121330004	0.91533030	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	121330005	123614971	NA	2284968	22705	3.09211372	22583	714	5442	mappable	0.34065417	9	NA	0.271528961984	0.00119617225	0.45267666551	0.09468019	0.09587636	121330005	121330031	123614883	123614971	0.95619665	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
12	123614972	123700586	DEL	85615	956	1.06569423	955	0	270	mappable	NA	NA	NA	0.217232646122	1.00000000000	0.40384567318	0.12205857	1.12205857	123614972	123614986	123699811	123700586	NA	missing	357669.15	NA	0.4774000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DEL
12	123700587	124270008	DEL	569422	5221	3.09211372	5204	9	1307	mappable	0.28928977	9	NA	0.262542340000	0.03846153846	0.48795432682	0.10460722	0.14306876	123700587	123710364	124269977	124270039	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	124270008	124280103	NA	10096	157	3.37228247	157	0	40	mappable	NA	NA	NA	NA	Inf	0.57275432682	0.15035903	Inf	124269977	124270039	124279972	124280103	NA	missing	1030684.00	NA	1.4540000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	124280104	125999988	NA	1719885	26545	2.96483474	26358	1449	6029	mappable	0.33549437	3	NA	0.267118360408	0.00061124694	0.39675432682	0.09655361	0.09716486	124280104	124280235	125999946	125999988	0.93883624	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	125999989	126002458	NA	2470	55	3.09211372	52	7	13	mappable	0.25320350	9	NA	0.248095727972	0.10000000000	0.50315432682	0.17745764	0.27745764	125999989	126000031	126002403	126002458	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
12	126002459	132910005	CTX	6907547	117834	3.09211372	117002	6690	27750	mappable	0.35615000	9	NA	0.284243360408	0.00013294337	0.46425432682	0.08802917	0.08816211	126002459	126002464	132909988	132910005	0.94509443	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
12	132910006	133710000	NA	799996	9492	2.96483474	9383	197	2026	mappable	0.34840765	3	NA	0.276435878184	0.00326797386	0.41118053837	0.10199069	0.10525866	132910006	132910023	133709997	133710003	0.93781692	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
12	133710000	133819926	NA	109927	1364	3.55036639	1363	2	343	mappable	0.13552610	NA	edge	0.073565635813	0.33333333333	0.64815432682	0.11943018	0.45276351	133709997	133710003	133819926	133819926	NA	missing	1115696.49	67.4922434	1.5294000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
13	19450038	114959992	NA	95509961	1367088	2.02648247	1361665	63763	349580	mappable	0.06845000	1	edge	0.000463961064	0.00001445379	0.00748820342	0.07544565	0.07546011	19450038	19450038	114959965	114960019	0.17605983	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
13	114959992	115099984	NA	139993	2303	2.16958046	2273	87	573	mappable	0.06600000	8	edge	0.003456639592	0.00854700855	0.12845432682	0.11699331	0.12554031	114959965	114960019	115099984	115099984	0.25964491	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
14	20330060	40380143	NA	20050087	268150	2.02648247	267085	13004	68625	mappable	0.06672258	1	edge	0.001905783436	0.00007108331	0.00994158992	0.08245007	0.08252115	20330060	20330060	40379977	40380143	0.14060743	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
14	40380144	40395008	NA	14865	143	2.25465237	143	0	29	mappable	NA	NA	NA	NA	Inf	0.09955432682	0.14430398	Inf	40380144	40380310	40389966	40400050	NA	missing	760612.00	NA	0.9808000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
14	40395008	67908946	NA	27513942	383301	2.02648247	381814	20074	97983	mappable	0.06705938	1	NA	0.000377891089	0.00004638219	0.01231631674	0.08092691	0.08097329	40389966	40400050	67908713	67908946	0.13505317	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
14	67908947	67909142	CTX	196	3	1.98398371	3	0	1	mappable	NA	NA	NA	NA	Inf	0.01504567318	0.26264954	Inf	67908947	67908982	67909137	67909142	NA	missing	677467.50	NA	0.8662000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
14	67909143	101139936	CTX	33230803	489372	2.02648247	487609	23282	122400	mappable	0.06947500	1	NA	0.000573757163	0.00003992972	0.03480212522	0.08004477	0.08008470	67909143	67909148	101139846	101140026	0.17401955	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
14	101139936	107259908	NA	6119975	79989	2.16958046	79241	4120	18393	mappable	0.06845000	8	edge	0.002025449999	0.00020546538	0.04628700506	0.08871109	0.08891656	101139846	101140026	107259908	107259908	0.21448748	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
15	20850000	20859924	NA	9925	165	1.92706299	127	0	40	mappable	NA	NA	edge	0.157579114248	0.02631578947	0.03914567318	0.15063813	0.17695391	20850000	20850000	20859924	20859924	NA	missing	2722290.00	NA	0.8421000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
15	22480079	23069956	NA	589878	4054	2.02648247	4010	229	1014	mappable	0.07594194	1	self	0.010243360408	0.00366300366	0.02544567318	0.10432937	0.10799237	22480079	22480079	23069956	23069956	0.15802336	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
15	23710146	24329926	NA	619781	10374	2.02648247	10315	747	2581	mappable	0.06720000	1	NA	0.001143360408	0.00124069479	0.00634567318	0.10394255	0.10518324	23710146	23710146	24329926	24329926	0.16267081	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
15	24329927	24830091	NA	500165	0	0.00000000	0	0	NA	mappable	NA	NA	NA	NA	Inf	0.88124567318	0.10564099	Inf	24329927	24329927	24830091	24830091	NA	missing	NA	NA	0.0000000	NA	NA	0.00000000	0.000000000	0.0000000	0	0	NA	0	HomoDel
15	24830092	25334959	NA	504868	7886	2.02648247	7847	670	1881	mappable	0.06572671	1	NA	0.001931639592	0.00141043724	0.00134567318	0.10556571	0.10697614	24830092	24830092	25329895	25334959	0.10637275	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
15	25334960	25434990	NA	100031	1232	1.92355540	1230	49	324	mappable	0.07055714	4	NA	0.002075503265	0.01960784314	0.06834567318	0.12040876	0.14001660	25334960	25340024	25419968	25434990	0.15061615	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
15	25434991	25500007	NA	65017	925	2.16958046	925	7	216	mappable	0.06902719	8	NA	0.000545548737	0.14285714286	0.05335432682	0.12508968	0.26794682	25434991	25450013	25489998	25500007	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
15	25500008	28529988	NA	3029981	47392	2.02648247	47199	2361	11731	mappable	0.06947500	1	self	0.001443360408	0.00039154268	0.01224567318	0.09288985	0.09328139	25500008	25510017	28529988	28529988	0.16630762	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
15	29100034	30369914	NA	1269881	18293	2.02648247	18241	1179	4456	mappable	0.06918571	1	self	0.001898915964	0.00081234768	0.00674567318	0.09863751	0.09944986	29100034	29100034	30369914	30369914	0.13763966	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
15	31160110	39299910	NA	8139801	106803	2.02648247	106343	5718	27142	mappable	0.06763333	1	NA	0.000031639592	0.00016186468	0.00234567318	0.08712106	0.08728292	31160110	31160110	39299818	39300002	0.16512840	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
15	39299910	39319963	NA	20054	355	2.17553021	355	0	93	mappable	NA	NA	NA	NA	Inf	0.06605432682	0.13994232	Inf	39299818	39300002	39319915	39320011	NA	missing	750422.61	NA	0.9473000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
15	39319963	59909934	NA	20589974	280734	2.02648247	279678	13136	71681	mappable	0.06645000	1	NA	0.002399674380	0.00007046223	0.00438754510	0.08231998	0.08239044	39319915	39320011	59909857	59909934	0.13992332	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
15	59909935	59959986	NA	50052	960	2.16958046	956	8	217	mappable	0.07459318	8	NA	0.005769139592	0.08333333333	0.06355432682	0.12811364	0.21144697	59909935	59910012	59959969	59960003	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
15	59959986	59970014	NA	10029	207	1.86730804	207	0	61	mappable	NA	NA	NA	NA	Inf	0.06444567318	0.15046769	Inf	59959969	59960003	59969984	59970044	NA	missing	678696.00	NA	0.8168000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
15	59970014	82479795	NA	22509785	301593	2.02648247	300396	12033	74787	mappable	0.06992500	1	NA	0.002607754764	0.00007558579	0.00297778434	0.08188650	0.08196209	59969984	59970044	82479795	82479795	0.14599569	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
15	83211507	102370055	NA	19158555	295729	2.02648247	294570	14493	73980	mappable	0.06911667	1	self	0.000405330136	0.00006389776	0.00995930063	0.08267372	0.08273761	83211507	83211507	102369997	102370113	0.15122540	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
15	102370055	102399920	NA	29866	462	2.16958046	426	0	133	mappable	NA	8	edge	0.010473893113	0.02777777778	0.05705432682	0.13453322	0.16231100	102369997	102370113	102399920	102399920	NA	missing	729901.36	NA	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
16	100010	260025	NA	160016	1582	2.16958046	1565	17	310	mappable	0.08188796	8	edge	0.021515289044	0.02941176471	0.10585432682	0.11568814	0.14509991	100010	100010	249955	270095	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
16	260025	1294925	NA	1034901	17835	1.92355540	17626	735	3678	mappable	0.07673621	4	NA	0.007991437331	0.00105932203	0.03034567318	0.10009478	0.10115411	249955	270095	1279714	1310136	0.18495177	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
16	1294925	1319987	NA	25063	214	1.75063237	214	0	45	mappable	NA	NA	NA	NA	Inf	0.11384567318	0.13686189	Inf	1279714	1310136	1319966	1320008	NA	missing	546115.70	NA	0.7674000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
16	1319987	2240809	NA	920823	15638	2.02648247	15580	299	3519	mappable	0.09120000	1	NA	0.017093360408	0.00280112045	0.01924567318	0.10094604	0.10374716	1319966	1320008	2240779	2240809	0.18265093	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
16	2240810	3890025	DEL	1649216	22405	1.03231837	22306	568	5329	mappable	0.94728929	2	NA	0.880193360408	0.00150150150	0.42104567318	0.09683660	0.09833810	2240810	2240840	3889915	3890025	0.97530309	2	361163.57	34.9893961	0.4632688	34.02873	0.9968863	0.99377256	0.003214349	1.0291040	1	0	1:0	1	DEL;LOH
16	3890026	3895654	NA	5629	74	1.56735237	73	0	22	mappable	NA	NA	NA	0.771518360408	1.00000000000	0.19144567318	0.16053087	1.16053087	3890026	3890136	3895547	3895654	NA	missing	542806.70	NA	0.6898000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
16	3895655	16289940	DEL	12394294	240633	2.02648247	239688	11380	58963	mappable	0.06610577	1	self	0.000324799064	0.00008113590	0.00572428896	0.08487821	0.08495935	3895655	3895701	16289940	16289940	0.17142098	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
16	16870104	18169896	NA	1299793	20491	2.02648247	20405	851	5198	mappable	0.06910000	1	self	0.001985027075	0.00106723586	0.00554567318	0.09847438	0.09954162	16870104	16870104	18169896	18169896	0.14652751	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
16	18800044	23549914	NA	4749871	49752	2.02648247	49524	2042	12344	mappable	0.06814324	1	NA	0.000031639592	0.00044072279	0.00135432682	0.09017353	0.09061426	18800044	18800044	23549825	23550003	0.16233162	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
16	23549914	23569992	NA	20079	256	2.18946515	256	0	62	mappable	NA	NA	NA	NA	Inf	0.07195432682	0.13992472	Inf	23549825	23550003	23569976	23569992	NA	missing	676397.50	NA	0.9532000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
16	23569993	29039945	NA	5469953	75299	2.02648247	74940	3279	18346	mappable	0.06700000	1	NA	0.000031639592	0.00027487631	0.00075432682	0.08935314	0.08962802	23569993	23570009	29039945	29039945	0.15363685	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
16	29670028	31959970	NA	2289943	17557	2.02648247	17472	468	4301	mappable	0.07588246	1	self	0.010108745023	0.00180831826	0.02195432682	0.09466613	0.09647445	29670028	29670028	31959970	31959970	0.17263991	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
16	32520030	32649899	NA	129870	3149	2.07538753	2739	1	1196	mappable	0.33333333	NA	NA	0.266390041824	0.00243309002	0.02365432682	0.11773911	0.12017220	32520030	32520030	32649899	32649899	NA	missing	1162143.70	77.4762468	0.9049000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
16	33590105	34491860	NA	901756	5125	1.98303897	5055	18	1554	mappable	0.08458406	NA	NA	0.142412591177	0.01136363636	0.01544567318	0.10110008	0.11246372	33590105	33590105	34491627	34491860	NA	missing	732116.32	39.1918986	0.8658000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
16	34491861	34492117	DUP	257	5	2.68687196	5	0	2	mappable	NA	NA	NA	NA	Inf	0.28255432682	0.24982436	Inf	34491861	34491933	34492110	34492117	NA	missing	909582.50	NA	1.1638000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
16	34492118	34506230	ITX	14113	191	2.65002701	190	0	52	mappable	NA	NA	NA	0.308876850974	1.00000000000	0.26695432682	0.14508800	1.14508800	34492118	34492180	34506057	34506230	NA	missing	897478.34	NA	1.1482000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
16	34506231	34509988	ITX	3758	70	2.59735763	69	0	12	mappable	NA	NA	NA	0.005981639592	1.00000000000	0.24465432682	0.16841043	1.16841043	34506231	34506257	34509936	34509988	NA	missing	880098.00	NA	1.1259000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
16	34509989	35279959	NA	769971	10045	2.02648247	10034	76	3068	mappable	0.06450000	1	self	0.007706639592	0.01149425287	0.00884567318	0.10227854	0.11377279	34509989	34510041	35279959	35279959	0.14456488	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
16	46450014	46629587	NA	179574	1954	2.02648247	1953	6	597	mappable	0.07482637	1	self	0.003179285140	0.14285714286	0.01035432682	0.11458548	0.25744262	46450014	46450014	46629527	46629587	NA	missing	693452.99	35.7876681	0.8841938	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
16	46629588	46633777	CTX	4190	52	3.32173876	51	0	14	mappable	NA	NA	NA	0.045225825638	1.00000000000	0.55135432682	0.16621326	1.16621326	46629588	46629646	46633763	46633777	NA	missing	1138927.07	NA	1.4326000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
16	46633778	46651706	INV	17929	201	3.09211372	199	1	57	mappable	0.34482759	9	NA	0.278108799279	0.33333333333	0.51305432682	0.14154274	0.47487608	46633778	46633785	46651651	46651706	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
16	46651707	78810004	NA	32158303	456838	2.02648247	455295	19933	115413	mappable	0.07187500	1	self	0.004187708483	0.00004656577	0.01936718411	0.08019668	0.08024325	46651707	46651733	78809963	78810045	0.22208732	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
16	78810004	82139973	NA	3329972	79451	2.16958046	79230	4099	19774	mappable	0.07408750	8	NA	0.006685249514	0.00023148148	0.06152876012	0.09230594	0.09253742	78809963	78810045	82139943	82140003	0.33973122	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
16	82139973	82150015	NA	10043	253	2.14472948	249	1	60	mappable	0.10256410	7	NA	0.113565246855	0.20000000000	0.00534567318	0.15044491	0.35044491	82139943	82140003	82149998	82150032	NA	missing	712108.32	38.4491405	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
16	82150015	83950006	NA	1799992	45392	2.16958046	45267	1962	11336	mappable	0.07308810	8	NA	0.005106518303	0.00047915668	0.05815432682	0.09624843	0.09672759	82149998	82150032	83949989	83950023	0.33400246	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
16	83950006	83989997	NA	39992	1012	2.14472948	1005	12	234	mappable	0.07011240	7	NA	0.108779275901	0.05263157895	0.12375432682	0.13082649	0.18345807	83949989	83950023	83989994	83989997	NA	missing	712108.32	38.4491405	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
16	83989998	85641870	NA	1651874	37115	2.16958046	36971	2041	8454	mappable	0.07709762	8	NA	0.008015653449	0.00045766590	0.05803727441	0.09682570	0.09728337	83989998	83990001	85641819	85641870	0.34924865	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
16	85641871	90109969	CTX	4468099	81591	1.03231837	81012	3619	18345	mappable	0.95210000	2	edge	0.887043360408	0.00023837902	0.36364567318	0.09053367	0.09077204	85641871	85641898	90109969	90109969	0.93894147	2	361163.57	34.9893961	0.4632688	34.02873	0.9968863	0.99377256	0.003214349	1.0291040	1	0	1:0	1	DEL;LOH
17	20080	78316	NA	58237	951	2.16958046	929	17	166	mappable	0.05030833	8	edge	0.016091342788	0.02564102564	0.09925432682	0.12634519	0.15198622	20080	20080	78232	78316	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
17	78317	78666	CTX	350	6	2.31204546	5	0	1	mappable	NA	NA	NA	0.471086705732	1.00000000000	0.12385432682	0.23665247	1.23665247	78317	78366	78621	78666	NA	missing	732545.00	NA	1.0051000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
17	78667	90008	CTX	11342	337	2.54468825	331	21	54	mappable	0.12288854	NA	NA	0.060982754347	0.03703703704	0.22235432682	0.14848485	0.18552189	78667	78803	89992	90024	NA	missing	764140.17	45.6361488	1.1036000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
17	90008	18239982	NA	18149977	231491	2.02648247	230242	11043	55844	mappable	0.06925714	1	self	0.001554229186	0.00008135373	0.00115173605	0.08294121	0.08302257	89992	90024	18239982	18239982	0.17809958	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
17	18750212	22239986	NA	3489775	25848	2.02648247	25138	983	6328	mappable	0.07133235	1	self	0.004036217551	0.00059066745	0.00104567318	0.09201874	0.09260941	18750212	18750212	22239986	22239986	0.16527658	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
17	25390040	42856518	NA	17466483	195501	2.02648247	194631	8232	48300	mappable	0.07038056	1	NA	0.000423620846	0.00010986596	0.00054152282	0.08313213	0.08324200	25390040	25390040	42856450	42856518	0.15230276	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
17	42856519	42856519	ITX	1	0	0.00000000	0	0	NA	mappable	NA	NA	NA	NA	Inf	0.88124567318	Inf	Inf	42856519	42856519	42856519	42856519	NA	missing	NA	NA	0.0000000	NA	NA	0.00000000	0.000000000	0.0000000	0	0	NA	0	HomoDel
17	42856520	44156763	DUP	1300244	13792	3.97172144	13750	323	3469	mappable	0.49700000	NA	NA	0.427725325582	0.00273972603	0.82655432682	0.09847196	0.10121168	42856520	42856598	44156744	44156763	0.98032292	2	1262858.18	94.2431479	1.7078000	32.27695	0.7501040	0.50020810	0.992517104	2.9792043	3	1	3:1	4	DUP
17	44156764	44156962	CTX	199	1	4.05627588	1	0	0	mappable	NA	NA	NA	NA	Inf	0.86235432682	0.26189581	Inf	44156764	44156835	44156835	44156962	NA	missing	1359485.70	NA	1.7436000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
17	44156963	44229326	DEL	72364	886	4.16728309	884	23	234	mappable	0.46033826	NA	NA	0.379527401592	0.04000000000	0.90935432682	0.12389283	0.16389283	44156963	44156977	44219920	44229326	NA	missing	1376879.94	101.9248788	1.7906000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
17	44229327	44279982	DEL	50656	825	6.27027938	818	15	222	mappable	0.63743737	NA	NA	0.567272877005	0.04545454545	1.79975432682	0.12797178	0.17342633	44229327	44230078	44279982	44279982	NA	missing	2023577.17	165.6664828	2.6810000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
17	44790026	44832531	NA	42506	406	5.89946804	374	0	85	mappable	NA	NA	NA	0.592072317147	0.03125000000	1.64275432682	0.13007810	0.16132810	44790026	44790026	44832414	44832531	NA	missing	1983440.26	NA	2.5240000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
17	44832532	50890014	CTX	6057483	73762	6.01496278	73416	3235	18222	mappable	0.65666566	NA	NA	0.587912204180	0.00027925161	1.69165432682	0.08876940	0.08904865	44832532	44832598	50889963	50890014	0.96242834	2	1955961.11	161.8020185	2.5729000	33.18274	0.8305902	0.66118039	1.018993678	4.9959691	5	1	5:1	6	DUP
17	50890015	50910022	NA	20008	342	6.33900938	342	0	86	mappable	NA	NA	NA	NA	Inf	1.82885432682	0.13997477	Inf	50890015	50890066	50909955	50910089	NA	missing	2133597.45	NA	2.7101000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
17	50910022	53556241	NA	2646220	38176	6.08369278	38070	1640	9927	mappable	0.65981621	NA	NA	0.593518360408	0.00057273769	1.72075432682	0.09374047	0.09431321	50909955	50910089	53556166	53556241	0.95988493	2	2075924.43	171.9606743	2.6020000	34.82404	0.8316957	0.66339131	1.023911921	5.0597809	5	1	5:1	6	DUP
17	53556242	53586591	CTX	30350	375	7.00269082	372	38	82	mappable	0.70514308	NA	NA	0.633594865293	0.02439024390	2.10985432682	0.13432367	0.15871391	53556242	53556436	53579849	53586591	1.00000000	2	2365723.35	201.0689605	2.9911000	34.52295	0.8530169	0.70603373	1.029277439	5.9734134	6	1	6:1	7	DUP
17	53586592	55543971	CTX	1957380	27849	6.00834959	27763	941	7145	mappable	0.65627073	NA	NA	0.587586217551	0.00097370983	1.68885432682	0.09569153	0.09666524	53586592	53590225	55543961	55543971	0.87458178	2	2013155.48	166.0568923	2.5701000	34.19024	0.8282032	0.65640632	1.032215459	4.9761341	5	1	5:1	6	DUP
17	55543972	55544137	ITX	166	1	5.19114753	1	0	1	mappable	NA	NA	NA	NA	Inf	1.34285432682	0.27118499	Inf	55543972	55544082	55544082	55544137	NA	missing	1584731.20	NA	2.2241000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
17	55544138	73196049	DUP	17651915	219136	4.06991772	218158	9503	54590	mappable	0.48989555	NA	NA	0.420705072645	0.00009541074	0.86813019432	0.08307952	0.08317493	55544138	55544158	73159980	73196049	0.96824052	2	1344864.06	99.9394392	1.7493759	33.55600	0.7468143	0.49362851	1.030445145	3.0394726	3	1	3:1	4	DUP
17	73196050	81149937	CTX	7953888	116736	4.01305392	115865	5965	25923	mappable	0.49132742	NA	edge	0.421243360408	0.00014628438	0.84405432682	0.08724774	0.08739403	73196050	73200035	81149937	81149937	0.94441772	2	1235620.80	91.7161830	1.7253000	31.26047	0.7460023	0.49200454	1.019306595	2.9937473	3	1	3:1	4	DUP
18	130031	14119956	NA	13989928	212786	2.96483474	211918	12377	53132	mappable	0.32502935	3	edge	0.257505146629	0.00007550019	0.37599096034	0.08425350	0.08432900	130031	130031	14119956	14119956	0.93748040	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
18	14119957	14910026	NA	790070	0	0.00000000	0	0	NA	mappable	NA	NA	NA	NA	Inf	0.88124567318	0.10208446	Inf	14119957	14119957	14910026	14910026	NA	missing	NA	NA	0.0000000	NA	NA	0.00000000	0.000000000	0.0000000	0	0	NA	0	HomoDel
18	14910027	14929888	NA	19862	364	2.78299948	364	0	97	mappable	NA	NA	NA	NA	Inf	0.32325432682	0.14007836	Inf	14910027	14910027	14929888	14929888	NA	missing	973325.10	NA	1.2045000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
18	18540053	20584777	NA	2044725	22760	2.96483474	22657	1061	5753	mappable	0.32995297	3	NA	0.258027843167	0.00085910653	0.39325432682	0.09540403	0.09626313	18540053	18540053	20579983	20584777	0.96981472	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
18	20584778	33968188	INV	13383411	186957	2.96483474	186412	6986	48943	mappable	0.33217500	3	NA	0.263693360408	0.00013280212	0.39495432682	0.08448107	0.08461387	20584778	20600020	33968186	33968188	0.94599264	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
18	33968189	46359940	CTX	12391756	176226	2.96483474	175670	8672	44948	mappable	0.33457692	3	NA	0.266557197065	0.00010836584	0.39599053317	0.08487928	0.08498764	33968189	33968230	46359860	46359940	0.95172646	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
18	46359941	47110020	NA	750081	10321	3.09211372	10264	319	2581	mappable	0.34747187	9	NA	0.284660360906	0.00265957447	0.43056651556	0.10247641	0.10513598	46359941	46360021	47109959	47110081	0.95459313	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
18	47110020	51268405	NA	4158386	65986	2.96483474	65733	2870	16841	mappable	0.34245000	3	NA	0.273968360408	0.00032020493	0.41285432682	0.09096039	0.09128060	47109959	47110081	51268348	51268405	0.95573027	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
18	51268406	52939032	INV	1670627	22155	3.99274196	22059	1807	5490	mappable	0.50133811	NA	NA	0.432868360408	0.00052548607	0.83545432682	0.09674942	0.09727491	51268406	51268438	52938964	52939032	0.99209359	2	1374028.35	103.0521263	1.7167000	34.93624	0.7538730	0.50774601	0.982721572	3.0100204	3	1	3:1	4	DUP
18	52939033	78009968	CTX	25070945	395459	3.96586499	393512	22375	98725	mappable	0.50317710	NA	edge	0.433293065321	0.00004111504	0.82407472615	0.08136858	0.08140969	52939033	52939116	78009968	78009968	0.96596121	2	1347579.67	101.0684755	1.7053204	34.49240	0.7538993	0.50779851	0.976002329	2.9898627	3	1	3:1	4	DUP
19	260137	19328157	NA	19068022	211900	2.02648247	210380	10064	47733	mappable	0.07045909	1	edge	0.000670380212	0.00008634833	0.00441849246	0.08269708	0.08278342	260137	260137	19327896	19328157	0.16854472	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
19	19328158	19387025	DUP	58868	511	2.02648247	507	33	142	mappable	0.10099681	1	self	0.030792296578	0.02702702703	0.00775432682	0.12622122	0.15324825	19328158	19328224	19386812	19387025	0.31043417	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
19	19387026	24569972	DUP	5182947	44899	2.02648247	44380	1837	11758	mappable	0.06947500	1	self	0.001931639592	0.00042444822	0.01485432682	0.08966462	0.09008907	19387026	19387107	24569972	24569972	0.16626934	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
19	27750002	27995010	NA	245009	7021	2.16958046	6872	44	2418	mappable	0.04461250	8	NA	0.000972943940	0.00518134715	0.03855432682	0.11171640	0.11689774	27750002	27750002	27989986	28000034	0.14274960	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
19	27995010	43209995	NA	15214989	190819	2.02648247	190018	7415	46865	mappable	0.06845000	1	NA	0.001693476322	0.00012172855	0.01278233620	0.08382585	0.08394757	27989986	28000034	43209995	43209995	0.15011449	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
19	43209996	43800005	NA	590010	0	0.00000000	0	0	NA	mappable	NA	NA	NA	NA	Inf	0.88124567318	0.10432761	Inf	43209996	43209996	43800005	43800005	NA	missing	NA	NA	0.0000000	NA	NA	0.00000000	0.000000000	0.0000000	0	0	NA	0	HomoDel
19	43800006	58981286	NA	15181281	161541	2.02648247	160554	7249	38088	mappable	0.07187500	1	NA	0.003393360408	0.00012141816	0.00084567318	0.08383709	0.08395851	43800006	43800006	58981285	58981286	0.17335505	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
19	58981287	59089999	NA	108713	1274	2.16958046	1255	57	251	mappable	0.10229853	8	edge	0.033462804852	0.01315789474	0.10295432682	0.11954455	0.13270244	58981287	58981288	59089999	59089999	0.01943107	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
2	20016	240011	NA	219996	3144	3.09211372	3130	169	772	mappable	0.32159473	9	edge	0.253113810357	0.00546448087	0.47605432682	0.11269436	0.11815884	20016	20016	239969	240053	0.96829737	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
2	240011	4380051	NA	4140041	70293	2.96483474	69637	3458	16325	mappable	0.29539559	3	NA	0.226018360408	0.00024319066	0.34185432682	0.09098679	0.09122998	239969	240053	4379960	4380142	0.92160215	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
2	4380051	4499982	NA	119932	2019	3.09211372	2013	130	504	mappable	0.31885799	9	NA	0.256918311244	0.00735294118	0.45185432682	0.11854060	0.12589354	4379960	4380142	4499963	4500001	0.91123211	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
2	4499982	13720016	NA	9220035	142662	2.96483474	142066	7760	35275	mappable	0.29478017	3	NA	0.226018360408	0.00011967449	0.36065432682	0.08644409	0.08656377	4499963	4500001	13719985	13720016	0.91066047	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
2	13720017	13779929	NA	59913	892	3.09211372	892	4	226	mappable	0.38809621	9	NA	0.319614567838	0.25000000000	0.44345432682	0.12601933	0.37601933	13720017	13720048	13779829	13780029	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
2	13779929	25889976	NA	12110054	171635	2.96483474	171112	8054	43384	mappable	0.29234038	3	NA	0.222946386345	0.00011659088	0.36649489838	0.08499895	0.08511554	13779829	13780029	25889941	25890011	0.93444065	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
2	25889976	25950087	NA	60112	706	3.14790619	692	41	152	mappable	0.22007585	NA	NA	0.155964335640	0.01818181818	0.47775432682	0.12598135	0.14416317	25889941	25890011	25949990	25950087	0.85846624	2	984116.72	60.7585103	1.3590000	31.60837	0.6196980	0.23939604	1.197154962	1.9507512	2	1	2:1	3	DUP
2	25950088	33159991	NA	7209904	100443	2.96483474	100068	4622	24920	mappable	0.29238724	3	NA	0.223906282854	0.00020012007	0.36735089303	0.08779034	0.08799046	25950088	25950185	33159973	33160009	0.93644060	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
2	33159991	33180018	NA	20028	329	3.09211372	329	2	69	mappable	0.34234234	9	NA	0.273860702750	0.50000000000	0.46855432682	0.13996065	0.63996065	33159973	33160009	33179973	33180018	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
2	33180019	34269976	NA	1089958	20455	2.96483474	20382	993	5199	mappable	0.29581282	3	NA	0.225786463856	0.00093808630	0.37235432682	0.09972157	0.10065966	33180019	33180064	34269887	34270065	0.94429532	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
2	34269976	34279931	NA	9956	207	3.21427433	207	0	47	mappable	NA	NA	NA	NA	Inf	0.50585432682	0.15058710	Inf	34269887	34270065	34279810	34280052	NA	missing	1017240.00	NA	1.3871000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
2	34279931	45116954	NA	10837026	183208	2.96483474	182591	9715	46601	mappable	0.29153824	3	NA	0.223451389863	0.00009678668	0.36942734765	0.08558176	0.08567855	34279810	34280052	45116946	45116954	0.92660670	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
2	45116955	74260023	CTX	29143071	430144	2.02648247	428634	22152	109938	mappable	0.06845000	1	NA	0.000008904302	0.00004226364	0.00147457539	0.08065606	0.08069832	45116955	45116973	74259894	74260023	0.13255093	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
2	74260024	74270091	NA	10068	129	2.15946959	129	0	29	mappable	NA	NA	NA	NA	Inf	0.05925432682	0.15040433	Inf	74260024	74260153	74269996	74270091	NA	missing	677762.90	NA	0.9405000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
2	74270092	87059860	NA	12789770	185968	2.02648247	185420	7711	48739	mappable	0.06962500	1	NA	0.000595134445	0.00012109470	0.00086270353	0.08471530	0.08483639	74270092	74270187	87059860	87059860	0.12540361	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
2	88330099	89229990	NA	899892	11882	2.02648247	11842	297	3189	mappable	0.06152500	1	self	0.003356639592	0.00296735905	0.00934567318	0.10111534	0.10408270	88330099	88330099	89229990	89229990	0.14516780	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
2	89840102	90239998	NA	399897	914	2.02648247	908	0	388	mappable	NA	1	self	0.014410524587	0.16666666667	0.01364567318	0.10747332	0.27413999	89840102	89840102	90239998	90239998	NA	missing	693452.99	NA	0.8841938	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
2	95580145	96239991	NA	659847	4446	1.97359155	4441	14	1163	mappable	0.16825317	NA	NA	0.082688995329	0.05263157895	0.01944567318	0.10345663	0.15608821	95580145	95580145	96239991	96239991	NA	missing	652393.08	37.7973770	0.8618000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
2	96239992	96740020	NA	500029	0	0.00000000	0	0	NA	mappable	NA	NA	NA	NA	Inf	0.88124567318	0.10564318	Inf	96239992	96239992	96740020	96740020	NA	missing	NA	NA	0.0000000	NA	NA	0.00000000	0.000000000	0.0000000	0	0	NA	0	HomoDel
2	96740021	99289998	NA	2549978	22617	2.02648247	22566	607	5677	mappable	0.06391389	1	NA	0.004706639592	0.00151975684	0.00244567318	0.09397589	0.09549565	96740021	96740021	99289985	99289998	0.12672084	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
2	99289999	99319962	NA	29964	383	1.88832856	383	0	112	mappable	NA	NA	NA	NA	Inf	0.05554567318	0.13449047	Inf	99289999	99290012	99319881	99320043	NA	missing	673866.60	NA	0.8257000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
2	99319962	100639963	NA	1320002	15650	2.02648247	15605	637	3911	mappable	0.06655000	1	NA	0.000513145788	0.00146627566	0.01013126612	0.09836658	0.09983286	99319881	99320043	100639868	100639963	0.11663170	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
2	100639964	100650008	NA	10045	119	1.92355540	119	13	27	mappable	0.12893452	4	NA	0.060452884218	0.07692307692	0.08874567318	0.15044166	0.22736474	100639964	100640059	100649974	100650042	NA	missing	634797.79	33.2302685	0.8406149	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
2	100650008	100660054	NA	10047	135	2.16958046	130	6	43	mappable	0.21201754	8	NA	0.035448306259	0.09090909091	0.05325432682	0.15043841	0.24134750	100649974	100650042	100659908	100660200	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
2	100660054	117587562	NA	16927509	208130	2.02648247	207528	9248	53186	mappable	0.06770000	1	self	0.001369139592	0.00010152284	0.00824567318	0.08328868	0.08339021	100659908	100660200	117587424	117587562	0.13675872	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
2	117587563	117591433	DUP	3871	72	2.14472948	69	0	13	mappable	NA	7	identical	0.131321565536	0.33333333333	0.04745432682	0.16780648	0.50113982	117587563	117587978	117591371	117591433	NA	missing	712108.32	NA	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
2	117591434	132189994	DUP	14598561	201736	2.02648247	201015	8883	50804	mappable	0.06851667	1	NA	0.000031639592	0.00010412328	0.00484567318	0.08403600	0.08414013	117591434	117591444	132189994	132189994	0.13565195	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
2	132189995	133009999	NA	820005	0	0.00000000	0	0	NA	mappable	NA	NA	NA	NA	Inf	0.88124567318	0.10180566	Inf	132189995	132189995	133009999	133009999	NA	missing	NA	NA	0.0000000	NA	NA	0.00000000	0.000000000	0.0000000	0	0	NA	0	HomoDel
2	133010000	133146248	NA	136249	3044	2.16958046	3007	0	787	mappable	NA	8	NA	0.016767169932	0.02702702703	0.05985432682	0.11726157	0.14428860	133010000	133010000	133146191	133146248	NA	missing	729901.36	NA	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
2	133146249	161700004	CTX	28553760	385446	2.02648247	384213	14877	100339	mappable	0.06639167	1	NA	0.001561115299	0.00006208095	0.00347853021	0.08075204	0.08081412	133146249	133146300	161699939	161700069	0.15552624	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
2	161700004	161709959	NA	9956	151	2.35621216	151	0	35	mappable	NA	NA	NA	NA	Inf	0.14255432682	0.15058710	Inf	161699939	161700069	161709900	161709959	NA	missing	745340.00	NA	1.0238000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
2	161709960	166840137	NA	5130178	67495	2.02648247	67320	1833	17954	mappable	0.06526667	1	NA	0.001917353878	0.00049800797	0.00735432682	0.08972401	0.09022202	161709960	161710019	166839978	166840296	0.14429206	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
2	166840137	166860001	NA	19865	335	2.14907742	335	0	107	mappable	NA	NA	NA	NA	Inf	0.05485432682	0.14007622	Inf	166839978	166840296	166859986	166860016	NA	missing	720753.29	NA	0.9361000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
2	166860001	242999969	NA	76139971	1048586	2.02648247	1044271	50079	265622	mappable	0.06845000	1	edge	0.000420315361	0.00001838472	0.00638848110	0.07638792	0.07640630	166859986	166860016	242999969	242999969	0.14691592	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
20	60479	114989	NA	54511	671	2.14472948	670	2	177	mappable	0.15683866	7	edge	0.075825330049	0.33333333333	0.09985432682	0.12711116	0.46044449	60479	60479	109901	120077	NA	missing	712108.32	38.4491405	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
20	114989	12770102	NA	12655117	199853	2.02648247	199174	9862	50112	mappable	0.07187500	1	NA	0.003361398286	0.00009488566	0.02996146807	0.08477013	0.08486501	109901	120077	12769934	12770270	0.19469799	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
20	12770102	12799975	NA	29874	317	2.20670670	317	0	89	mappable	NA	NA	NA	NA	Inf	0.07925432682	0.13452973	Inf	12769934	12770270	12799930	12799975	NA	missing	750875.53	NA	0.9605000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
20	12799976	18339969	NA	5539995	88227	2.02648247	87998	4292	22406	mappable	0.06864128	1	NA	0.000340489712	0.00022119000	0.01949226759	0.08927992	0.08950111	12799976	12800021	18339857	18339969	0.21185626	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
20	18339970	18360006	NA	20037	342	2.22064165	342	0	89	mappable	NA	NA	NA	NA	Inf	0.08515432682	0.13995430	Inf	18339970	18340082	18359994	18360018	NA	missing	747220.89	NA	0.9664000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
20	18360006	22174945	NA	3814942	56628	2.02648247	56459	2205	14328	mappable	0.07205000	1	NA	0.002654792916	0.00042122999	0.00708070246	0.09147779	0.09189902	18359994	18360018	22169885	22174945	0.18491307	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
20	22174946	22200017	NA	25072	347	2.16958046	342	24	88	mappable	0.05186655	8	NA	0.008067353878	0.03448275862	0.04505432682	0.13685704	0.17133980	22174946	22180006	22199966	22200017	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
20	22200018	25729738	NA	3529721	54243	1.92355540	54099	2494	13512	mappable	0.06502500	4	NA	0.000031639592	0.00037907506	0.03404567318	0.09194928	0.09232835	22200018	22200069	25729738	25729738	0.14460373	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
20	29810057	32539986	NA	2729930	36226	2.02648247	36039	1394	8771	mappable	0.06951389	1	NA	0.000031639592	0.00063251107	0.00225432682	0.09354348	0.09417599	29810057	29810057	32539943	32539986	0.13574845	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
20	32539987	32550053	NA	10067	163	2.15450969	163	0	32	mappable	NA	NA	NA	NA	Inf	0.05715432682	0.15040595	Inf	32539987	32540030	32549999	32550107	NA	missing	702408.00	NA	0.9384000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
20	32550053	61390022	NA	28839977	437535	2.02648247	435821	14360	108199	mappable	0.06845000	1	NA	0.002151594985	0.00006221227	0.01219124005	0.08070515	0.08076736	32549999	32550107	61389920	61390022	0.15587075	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
20	61390023	61399997	NA	9975	200	2.20245536	200	0	42	mappable	NA	NA	NA	NA	Inf	0.07745432682	0.15055592	Inf	61390023	61390125	61399995	61399997	NA	missing	652475.70	NA	0.9587000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
20	61399998	62249984	NA	849987	15656	2.02648247	15461	1045	3216	mappable	0.07470000	1	NA	0.006218360408	0.00080645161	0.00674567318	0.10153789	0.10234434	61399998	61400000	62249858	62250110	0.26011970	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
20	62249984	62909989	NA	660006	8554	2.16958046	8437	434	1721	mappable	0.07540000	8	edge	0.006818360408	0.00181488203	0.04705432682	0.10345477	0.10526965	62249858	62250110	62909989	62909989	0.31209233	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
21	10720001	11179964	NA	459964	5133	2.37061948	4495	0	2414	mappable	NA	NA	edge	0.322878227476	0.00156739812	0.14865432682	0.10631986	0.10788726	10720001	10720001	11179964	11179964	NA	missing	2536685.16	NA	1.0299000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
21	15410077	16599980	NA	1189904	18987	2.96483474	18838	892	4880	mappable	0.32055000	3	NA	0.249301693741	0.00096061479	0.40315432682	0.09909617	0.10005679	15410077	15410077	16599943	16600017	0.96625039	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
21	16599980	16609960	NA	9981	225	3.16443918	225	4	49	mappable	0.41231423	NA	NA	0.343832585997	0.25000000000	0.48475432682	0.15054608	0.40054608	16599943	16600017	16609911	16609960	NA	missing	1055628.80	73.9882686	1.3660000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
21	16609961	16929995	NA	320035	5342	2.96483474	5321	99	1447	mappable	0.34322738	3	NA	0.274745744462	0.00833333333	0.38585432682	0.10936211	0.11769544	16609961	16610010	16929955	16929995	0.98172323	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
21	16929996	16960025	NA	30030	599	3.11554876	593	0	173	mappable	NA	NA	NA	0.337143747255	0.16666666667	0.46405432682	0.13446176	0.30112843	16929996	16930036	16959972	16960025	NA	missing	1035085.75	NA	1.3453000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
21	16960026	19279912	NA	2319887	35260	2.96483474	35084	1427	9193	mappable	0.31838553	3	NA	0.253418360408	0.00062383032	0.41235432682	0.09458222	0.09520605	16960026	16960079	19279795	19280029	0.93324515	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
21	19279912	19289997	NA	10086	189	3.09211372	189	1	54	mappable	0.39024390	9	NA	0.321762262847	1.00000000000	0.49865432682	0.15037519	1.15037519	19279795	19280029	19289982	19289997	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
21	19289998	33150012	NA	13860015	222799	2.96483474	221854	9663	58210	mappable	0.32733271	3	NA	0.260268360408	0.00009427736	0.39175432682	0.08430130	0.08439558	19289998	19290013	33149915	33150109	0.95980374	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
21	33150012	33185009	NA	34998	498	3.09211372	490	16	115	mappable	0.32625112	9	NA	0.251859652543	0.04166666667	0.47315432682	0.13249434	0.17416100	33149915	33150109	33179961	33190057	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
21	33185009	37529952	NA	4344944	63276	2.96483474	62931	2289	15985	mappable	0.34745833	3	NA	0.280818360408	0.00037965072	0.36185432682	0.09069922	0.09107887	33179961	33190057	37529899	37529952	0.94858857	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
21	37529953	37599999	NA	70047	1119	3.03831608	1117	5	269	mappable	0.37672372	NA	NA	0.334826643031	0.14285714286	0.43135432682	0.12425420	0.26711134	37529953	37530006	37599970	37600028	NA	missing	983251.43	67.2750979	1.3126000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
21	37599999	39520622	NA	1920624	27190	2.96483474	27013	1646	6576	mappable	0.34410449	3	NA	0.278166817198	0.00054854635	0.36455432682	0.09581690	0.09636545	37599970	37600028	39520406	39520622	0.96465559	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
21	39520623	48099931	CTX	8579309	141577	2.96483474	140595	7192	32902	mappable	0.34930000	3	edge	0.280818360408	0.00012233912	0.33575432682	0.08683409	0.08695642	39520623	39520657	48099931	48099931	0.94415140	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
22	16850007	40474795	NA	23624790	287206	2.02648247	285821	13187	68713	mappable	0.06912500	1	edge	0.000071813058	0.00006862476	0.00436849199	0.08165332	0.08172195	16850007	16850007	40474650	40474795	0.16096734	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
22	40474796	40480095	CTX	5300	79	1.53050742	73	0	15	mappable	NA	NA	NA	0.846257785359	0.16666666667	0.20704567318	0.16165827	0.32832494	40474796	40474803	40479891	40480095	NA	missing	490338.80	NA	0.6742000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
22	40480096	41015023	NA	534928	6207	1.03231837	6171	346	1586	mappable	0.94853382	2	NA	0.879443360408	0.00261780105	0.41204567318	0.10510282	0.10772062	40480096	40480300	41009979	41020067	1.00000000	2	361163.57	34.9893961	0.4632688	34.02873	0.9968863	0.99377256	0.003214349	1.0291040	1	0	1:0	1	DEL;LOH
22	41015023	47459980	NA	6444960	91429	2.02648247	90957	4395	21418	mappable	0.07187500	1	self	0.004319025343	0.00020546538	0.01219693700	0.08841835	0.08862381	41009979	41020067	47459955	47460005	0.17853140	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
22	47459980	50620080	NA	3160102	63863	1.92355540	63340	3813	14566	mappable	0.06845000	4	NA	0.000091411607	0.00023062731	0.03736387778	0.09262887	0.09285950	47459955	47460005	50619960	50620200	0.16938493	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
22	50620080	50640086	NA	20007	321	2.16958046	319	27	56	mappable	0.05996970	8	NA	0.003456639592	0.03448275862	0.04915432682	0.13997548	0.17445823	50619960	50620200	50639965	50640086	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
22	50640087	51110048	NA	469962	6551	2.02648247	6466	357	1417	mappable	0.07187500	1	self	0.000031639592	0.00226244344	0.00814567318	0.10614480	0.10840725	50640087	50640208	51109992	51110104	0.17002233	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
22	51110048	51179984	NA	69937	917	2.16958046	909	55	189	mappable	0.08547647	8	edge	0.031504661778	0.01587301587	0.07275432682	0.12427170	0.14014472	51109992	51110104	51179984	51179984	0.13655275	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
3	100074	9380052	NA	9279980	168318	2.02648247	167639	9541	42237	mappable	0.06845000	1	edge	0.000169299657	0.00009785693	0.00641736427	0.08640917	0.08650703	100074	100074	9379979	9380125	0.17162838	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
3	9380052	9420063	NA	40012	608	2.12215227	608	0	140	mappable	NA	NA	NA	NA	Inf	0.04345432682	0.13082032	Inf	9379979	9380125	9419929	9420197	NA	missing	711650.96	NA	0.9247000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
3	9420063	10400003	NA	979941	10954	2.02648247	10922	176	2753	mappable	0.06947849	1	NA	0.012615582630	0.00480769231	0.00265432682	0.10049072	0.10529841	9419929	9420197	10399862	10400003	0.19555978	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
3	10400004	10619993	NA	219990	3602	1.92355540	3601	176	861	mappable	0.05257885	4	NA	0.015902793438	0.00564971751	0.06314567318	0.11269461	0.11834432	10400004	10400145	10619931	10619993	0.07016887	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
3	10619994	10629918	NA	9925	168	2.03405505	168	0	41	mappable	NA	NA	NA	NA	Inf	0.00615432682	0.15063813	Inf	10619994	10620056	10629804	10630032	NA	missing	646874.30	NA	0.8874000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
3	10629918	11099935	NA	470018	7701	1.92355540	7680	235	1894	mappable	0.05810000	4	NA	0.007706639592	0.00390625000	0.04424567318	0.10614384	0.11005009	10629804	10630032	11099784	11100086	0.15065535	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
3	11099935	29289100	NA	18189173	269974	2.02648247	268912	13037	68390	mappable	0.06659091	1	self	0.000654102374	0.00007092702	0.00280626013	0.08293051	0.08300144	11099784	11100086	29288986	29289100	0.13135761	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
3	29289101	29363611	DUP	74511	1074	2.02648247	1067	50	292	mappable	0.07014103	1	self	0.001659386049	0.01754385965	0.01535432682	0.12356994	0.14111380	29289101	29289239	29363581	29363611	0.21944985	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
3	29363612	41964973	DUP	12601363	173729	2.02648247	173081	7688	44525	mappable	0.06709643	1	self	0.000746813078	0.00011997600	0.00002054266	0.08479220	0.08491217	29363612	29363636	41959920	41964973	0.14155415	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
3	41964974	42029989	NA	65016	1020	2.13585103	1014	2	256	mappable	0.05555556	NA	identical	0.381390728829	0.12500000000	0.04925432682	0.12508985	0.25008985	41964974	41970027	42029951	42029989	NA	missing	720853.84	38.0450637	0.9305000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
3	42029990	90499969	NA	48469983	668967	2.02648247	666927	25198	171406	mappable	0.06845000	1	self	0.001174472057	0.00003671342	0.00582875546	0.07833740	0.07837412	42029990	42030028	90499969	90499969	0.13831687	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
3	93570175	131360005	NA	37789842	512224	2.02648247	510426	24073	131172	mappable	0.06845000	1	NA	0.000188227479	0.00003865332	0.00383798143	0.07945495	0.07949361	93570175	93570175	131359989	131360021	0.14858536	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
3	131360005	131370037	NA	10033	151	2.17080649	151	0	37	mappable	NA	NA	NA	NA	Inf	0.06405432682	0.15046118	Inf	131359989	131360021	131369933	131370141	NA	missing	731447.50	NA	0.9453000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
3	131370037	197779892	NA	66409858	908084	2.02648247	904830	43067	233072	mappable	0.06845000	1	edge	0.000097291927	0.00002158895	0.00938183275	0.07696779	0.07698938	131369933	131370141	197779892	197779892	0.14889868	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
4	50084	279998	NA	229915	2281	2.16958046	2250	109	646	mappable	0.07570574	8	edge	0.009742350307	0.00714285714	0.09485432682	0.11229179	0.11943465	50084	50084	279990	280006	0.33016945	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
4	279998	740279	NA	460282	5440	2.02648247	5355	321	1186	mappable	0.07674032	1	self	0.006818360408	0.00246305419	0.01454567318	0.10631422	0.10877728	279990	280006	739882	740676	0.14136668	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
4	740279	750067	NA	9789	198	2.14472948	194	10	35	mappable	0.12776041	7	NA	0.105393360408	0.07142857143	0.07505432682	0.15086431	0.22229288	739882	740676	749945	750189	NA	missing	712108.32	38.4491405	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
4	750067	2490044	NA	1739978	26119	1.92355540	25948	807	5812	mappable	0.07314559	4	NA	0.006818360408	0.00102459016	0.03504567318	0.09647557	0.09750016	749945	750189	2489986	2490102	0.19523999	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
4	2490044	8389988	NA	5899945	102428	2.02648247	101571	5300	23753	mappable	0.06845000	1	self	0.000095526642	0.00016241676	0.03080848608	0.08891944	0.08908185	2489986	2490102	8389861	8389988	0.16243939	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
4	8389989	8939952	NA	549964	9507	1.92355540	9472	266	2201	mappable	0.06957500	4	NA	0.001385211021	0.00332225914	0.03604567318	0.10488239	0.10820465	8389989	8390116	8939952	8939952	0.17995209	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
4	9800043	9905416	NA	105374	1924	1.92355540	1924	7	525	mappable	0.05397607	4	NA	0.014505569883	0.14285714286	0.03194567318	0.11986700	0.26272414	9800043	9800043	9905412	9905416	NA	missing	634797.79	33.2302685	0.8406149	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
4	9905417	9972533	DUP	67117	1351	2.70600299	1348	0	328	mappable	NA	NA	NA	0.083914531579	0.33333333333	0.29065432682	0.12473190	0.45806523	9905417	9905428	9972428	9972533	NA	missing	897381.66	NA	1.1719000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
4	9972534	19692759	NA	9720229	156148	2.02648247	155568	8865	39033	mappable	0.06938707	1	self	0.000226140833	0.00010587612	0.01261225104	0.08616026	0.08626613	9972534	9972584	19692682	19692759	0.17128318	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
4	19692760	19715594	DUP	22835	326	2.71899320	326	4	81	mappable	0.29218501	NA	identical	0.223703369279	0.25000000000	0.29615432682	0.13813148	0.38813148	19692760	19692827	19715574	19715594	NA	missing	920431.29	59.0778611	1.1774000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
4	19715595	33520044	DUP	13804450	215447	2.02648247	214691	10320	55397	mappable	0.06845000	1	NA	0.001655521092	0.00009028530	0.00567657173	0.08432190	0.08441219	19715595	19715602	33519992	33520044	0.16884762	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
4	33520045	33539989	NA	19945	256	2.17080649	256	0	64	mappable	NA	NA	NA	NA	Inf	0.06405432682	0.14001936	Inf	33520045	33520097	33539968	33539989	NA	missing	716412.79	NA	0.9453000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
4	33539990	49089961	NA	15549972	224097	2.02648247	223201	12428	57572	mappable	0.06729808	1	NA	0.000031639592	0.00007505254	0.00055432682	0.08371560	0.08379066	33539990	33540011	49089961	49089961	0.14627399	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
4	52680564	130134295	NA	77453742	1049944	2.02648247	1046303	54044	271150	mappable	0.06845000	1	NA	0.000182401061	0.00001733613	0.00117486760	0.07631598	0.07633331	52680564	52680564	130134266	130134295	0.15653660	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
4	130134296	130134461	CTX	166	2	2.02366289	2	0	0	mappable	NA	NA	NA	NA	Inf	0.00175432682	0.27118499	Inf	130134296	130134397	130134448	130134461	NA	missing	695481.10	NA	0.8830000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
4	130134462	190799944	CTX	60665495	872343	2.02648247	868566	41411	224144	mappable	0.06845000	1	edge	0.000025381696	0.00002213075	0.00284333837	0.07735635	0.07737848	130134462	130134484	190799944	190799944	0.15507242	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
5	9999	15255752	CTX	15245759	248582	2.16958046	247460	12892	60389	mappable	0.08472778	8	edge	0.018322956898	0.00007136231	0.08490948689	0.08381561	0.08388697	9999	50017	15255741	15255752	0.47601162	2	729901.36	38.2604611	0.9447809	33.72158	0.5248763	0.04975262	1.030819073	1.1387614	1	1	1:1	2	TCNneutral
5	15255753	15258786	DUP	3034	53	2.32007577	53	0	14	mappable	NA	NA	NA	NA	Inf	0.12725432682	0.17290560	Inf	15255753	15255816	15258774	15258786	NA	missing	825323.00	NA	1.0085000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
5	15258787	15279012	DUP	20226	176	2.54374351	175	0	57	mappable	NA	NA	NA	0.031444602555	1.00000000000	0.22195432682	0.13982178	1.13982178	15258787	15258944	15269982	15279012	NA	missing	864052.20	NA	1.1032000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
5	15279013	15332766	INV	53754	719	2.14472948	719	6	183	mappable	0.20653959	7	NA	0.138057953709	0.16666666667	0.10595432682	0.12727436	0.29394102	15279013	15280011	15332674	15332766	NA	missing	712108.32	38.4491405	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
5	15332767	28919984	INV	13587219	192052	2.02648247	191416	8770	50725	mappable	0.06639167	1	NA	0.002622463462	0.00010632642	0.00090623984	0.08440333	0.08450966	15332767	15332778	28919934	28919984	0.14611429	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
5	28919985	28929965	NA	9981	232	2.22111402	232	0	71	mappable	NA	NA	NA	NA	Inf	0.08535432682	0.15054608	Inf	28919985	28920035	28929904	28929965	NA	missing	744073.30	NA	0.9666000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
5	28929966	46399990	NA	17470025	248215	2.02648247	247390	11050	64608	mappable	0.06786538	1	NA	0.000031639592	0.00008421053	0.00484567318	0.08313112	0.08321533	28929966	28930027	46399990	46399990	0.14106014	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
5	49470005	68829703	NA	19359701	256825	2.02648247	256043	11745	67000	mappable	0.06729808	1	self	0.000028226628	0.00007982757	0.00003302710	0.08262225	0.08270208	49470005	49470005	68829703	68829703	0.13411741	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
5	70750153	93900064	NA	23149912	299987	2.02648247	298989	13720	78203	mappable	0.06804133	1	self	0.000150923212	0.00006794401	0.00051328937	0.08175110	0.08181904	70750153	70750153	93899996	93900132	0.14741797	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
5	93900064	93923714	NA	23651	382	2.14472948	382	13	88	mappable	0.15430166	7	NA	0.085820018233	0.07692307692	0.06715432682	0.13764991	0.21457299	93899996	93900132	93919877	93923714	NA	missing	712108.32	38.4491405	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
5	93923715	93939548	CTX	15834	154	3.09211372	145	0	39	mappable	NA	9	NA	0.260204270289	0.11111111111	0.47955432682	0.14336159	0.25447270	93923715	93930011	93939509	93939548	NA	missing	1023415.67	NA	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
5	93939549	93940001	CTX	453	4	3.15215753	4	0	0	mappable	NA	NA	NA	NA	Inf	0.47955432682	0.22667083	Inf	93939549	93939561	93939861	93940001	NA	missing	1076991.20	NA	1.3608000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
5	93940002	99009949	CTX	5069949	68958	2.02648247	68708	2804	18007	mappable	0.06677500	1	NA	0.002871855884	0.00032743942	0.00232961558	0.08979264	0.09012008	93940002	93940186	99009858	99010040	0.12486246	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
5	99009949	99019999	NA	10051	139	1.84156381	139	0	36	mappable	NA	NA	NA	NA	Inf	0.07534567318	0.15043191	Inf	99009858	99010040	99019955	99020043	NA	missing	667893.80	NA	0.8059000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
5	99019999	137788312	NA	38768320	567905	2.02648247	566116	25863	147752	mappable	0.06845000	1	NA	0.000348001988	0.00003616506	0.00097007603	0.07933871	0.07937488	99019955	99020043	137788249	137788312	0.14206994	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
5	137788313	137788469	CTX	157	1	2.03665309	1	0	1	mappable	NA	NA	NA	NA	Inf	0.00725432682	0.27417464	Inf	137788313	137788342	137788342	137788469	NA	missing	658958.00	NA	0.8885000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
5	137788470	151240342	CTX	13451875	185336	2.02648247	184712	6832	47137	mappable	0.06849789	1	NA	0.000149919908	0.00013412017	0.00076039131	0.08445481	0.08458893	137788470	137788539	151240336	151240342	0.14601805	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
5	151240548	180689979	CTX	29449435	408613	2.02648247	407045	20334	101155	mappable	0.06845000	1	edge	0.000277010543	0.00004565793	0.00143331647	0.08060701	0.08065267	151240548	151240613	180689979	180689979	0.14910357	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
6	201976	31898752	NA	31696778	473617	2.02648247	471262	25592	117399	mappable	0.06748864	1	edge	0.000241552801	0.00003578202	0.01080388712	0.08026380	0.08029958	201976	201976	31869867	31898752	0.16241621	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
6	31898753	31922904	DUP	24152	357	2.96483474	357	26	78	mappable	0.36616114	3	identical	0.297679499022	0.03846153846	0.39365432682	0.13736400	0.17582554	31898753	31900016	31922880	31922904	NA	missing	1004421.01	66.2942800	1.2814883	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
6	31922905	58019982	DUP	26097081	386165	2.02648247	381652	17568	96104	mappable	0.06873017	1	self	0.002500516799	0.00004529191	0.00282311909	0.08117745	0.08122274	31922905	31923052	58019982	58019982	0.16054275	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
6	58610011	58769997	NA	159987	572	2.02648247	572	16	162	mappable	0.08301111	1	self	0.014529471519	0.06250000000	0.03265432682	0.11568989	0.17818989	58610011	58610011	58769997	58769997	NA	missing	693452.99	35.7876681	0.8841938	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
6	61890002	151429788	NA	89539794	1238039	2.02648247	1233695	59126	322051	mappable	0.06845000	1	NA	0.001422709729	0.00001575572	0.00181941532	0.07571162	0.07572737	61890002	61890002	151429726	151429788	0.12529519	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
6	151429789	151442386	INV	12598	188	2.98234010	188	0	46	mappable	NA	NA	NA	NA	Inf	0.40765432682	0.14683310	Inf	151429789	151429877	151439981	151442386	NA	missing	966617.95	NA	1.2889000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
6	151442387	151442693	INV	307	0	0.00000000	0	0	NA	mappable	NA	NA	NA	NA	Inf	0.88124567318	0.24206936	Inf	151442387	151442387	151442693	151442693	NA	missing	NA	NA	0.0000000	NA	NA	0.00000000	0.000000000	0.0000000	0	0	NA	0	HomoDel
6	151442694	151463845	INV	21152	197	3.52863732	197	0	49	mappable	NA	NA	NA	NA	Inf	0.63895432682	0.13919331	Inf	151442694	151450039	151463837	151463845	NA	missing	1214538.59	NA	1.5202000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
6	151463846	154115400	CTX	2651556	39502	2.96483474	39363	1962	10214	mappable	0.29915603	3	NA	0.228143577715	0.00047596383	0.37976602749	0.09372771	0.09420367	151463846	151463909	154115398	154115400	0.92773796	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
6	154115401	155250002	CTX	1134602	17161	2.96483474	17069	672	4576	mappable	0.30190109	3	NA	0.236293360408	0.00130890052	0.37405432682	0.09943444	0.10074334	154115401	154115584	155249953	155250002	0.91945841	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
6	155250003	155329975	NA	79973	973	3.09211372	973	82	225	mappable	0.30928488	9	NA	0.240803244129	0.01219512195	0.46085432682	0.12279562	0.13499075	155250003	155250052	155329941	155330009	0.67549442	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
6	155329975	156569914	NA	1239940	19810	2.96483474	19724	1261	4916	mappable	0.29792500	3	NA	0.229443360408	0.00074239050	0.36695432682	0.09880525	0.09954764	155329941	155330009	156569822	156569914	0.91933859	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
6	156569915	156589965	NA	20051	376	3.09211372	375	4	93	mappable	0.29821987	9	NA	0.241148175055	0.20000000000	0.45025432682	0.13994443	0.33994443	156569915	156570007	156589907	156589965	NA	missing	1023415.67	67.9827596	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
6	156589966	160319989	NA	3730024	53632	2.96483474	53304	3081	13249	mappable	0.30330813	3	NA	0.233185601787	0.00029342723	0.36355432682	0.09161388	0.09190731	156589966	156590024	160319964	160320014	0.95309247	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
6	160319989	160330051	NA	10063	181	3.21947041	181	12	40	mappable	0.21570970	NA	NA	0.147228058684	0.08333333333	0.50805432682	0.15041244	0.23374577	160319964	160320014	160329971	160330051	NA	missing	965941.20	59.1170522	1.3893000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
6	160330052	162870068	NA	2540017	39096	2.96483474	38851	2519	9490	mappable	0.30337707	3	NA	0.236293360408	0.00036179450	0.35685432682	0.09400084	0.09436263	160330052	160330132	162869924	162870212	0.93486513	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
6	162870068	163020131	NA	150064	2714	3.09211372	2703	331	652	mappable	0.32793602	9	NA	0.257044288588	0.00292397661	0.43955432682	0.11631140	0.11923538	162869924	162870212	163019923	163020339	0.95337880	2	1023415.67	67.9827596	1.3353777	33.45206	0.6675594	0.33511875	1.027944225	2.0641695	2	1	2:1	3	DUP
6	163020131	169030008	NA	6009878	95637	2.96483474	95064	5321	22872	mappable	0.30388255	3	NA	0.236293360408	0.00016966407	0.34785432682	0.08881427	0.08898393	163019923	163020339	169029984	169030032	0.91557281	2	1004421.01	66.2942800	1.2814883	34.21181	0.6633634	0.32672688	0.998071767	1.9667630	2	1	2:1	3	DUP
6	169030008	169049974	NA	19967	378	2.57751804	378	0	91	mappable	NA	NA	NA	NA	Inf	0.23625432682	0.14000377	Inf	169029984	169030032	169049940	169049974	NA	missing	885594.04	NA	1.1175000	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
6	169049975	170899935	NA	1849961	32030	2.80223019	31494	2062	6943	mappable	0.30563929	NA	edge	0.235046493144	0.00038505968	0.33139656222	0.09606580	0.09645086	169049975	169050009	170899935	170899935	0.93591161	2	932616.92	60.6851991	1.2126422	33.56955	0.6540245	0.30804900	0.969502996	1.8327272	2	1	2:1	3	DUP
7	10033	1549981	CTX	1539949	26695	3.30908323	26391	1477	5612	mappable	0.50171927	NA	edge	0.433381129452	0.00056148231	0.54599605373	0.09730253	0.09786401	10033	40386	1549962	1549981	0.98048512	2	1008820.11	75.4067554	1.4272417	30.85255	0.7521007	0.50420143	0.820319362	2.4887639	sub	1	sub:1	sub	DUP
7	1549982	1570008	NA	20027	412	3.03052196	412	25	116	mappable	0.46133298	NA	NA	0.392851336534	0.04000000000	0.42805432682	0.13996136	0.17996136	1549982	1550001	1569924	1570008	NA	missing	930541.37	68.0010999	1.3093000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
7	1570009	31900653	NA	30330648	485359	3.51800921	483539	25841	122338	mappable	0.50342500	6	NA	0.436053255668	0.00003615198	0.62521688732	0.08046906	0.08050521	1570009	1570093	31900627	31900653	0.96538839	2	1191338.36	89.0097562	1.5157001	34.30811	0.7514862	0.50297246	0.874273732	2.6437355	sub	1	sub:1	sub	DUP
7	31900654	31902400	INV	1747	29	3.70246990	29	0	10	mappable	NA	NA	NA	NA	Inf	0.71255432682	0.18568957	Inf	31900654	31900678	31902396	31902400	NA	missing	1312643.00	NA	1.5938000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
7	31902401	31906733	INV	4333	91	3.70246990	91	0	26	mappable	NA	NA	NA	NA	Inf	0.71255432682	0.16554715	Inf	31902401	31902488	31906684	31906733	NA	missing	1312643.00	NA	1.5938000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
7	31906734	57999988	CTX	26093259	343025	3.51800921	341842	18694	86429	mappable	0.50169481	6	NA	0.434768501489	0.00005031193	0.60624498406	0.08117814	0.08122845	31906734	31906954	57999988	57999988	0.97434390	2	1191338.36	89.0097562	1.5157001	34.30811	0.7514862	0.50297246	0.874273732	2.6437355	sub	1	sub:1	sub	DUP
7	61530139	64542511	NA	3012373	29271	3.51800921	28825	690	9229	mappable	0.49304725	6	NA	0.422447290539	0.00088028169	0.64565432682	0.09292614	0.09380642	61530139	61530139	64469928	64542511	0.98759935	2	1191338.36	89.0097562	1.5157001	34.30811	0.7514862	0.50297246	0.874273732	2.6437355	sub	1	sub:1	sub	DUP
7	64542512	65236553	DUP	694042	2804	3.51800921	2799	7	748	mappable	0.48769400	6	NA	0.427760030119	0.08333333333	0.67265432682	0.10306801	0.18640134	64542512	64680122	64899988	65236553	NA	missing	1191338.36	89.0097562	1.5157001	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
7	65236554	65595894	DUP	359341	1266	3.51800921	1266	39	350	mappable	0.48960862	6	NA	0.421126978420	0.02564102564	0.65045432682	0.10837175	0.13401278	65236554	65300239	65559856	65595894	0.89748667	2	1191338.36	89.0097562	1.5157001	34.30811	0.7514862	0.50297246	0.874273732	2.6437355	sub	1	sub:1	sub	DUP
7	65595895	72229988	CTX	6634096	80969	3.51800921	80580	3697	19916	mappable	0.49935415	6	NA	0.431224711208	0.00024473813	0.62520373585	0.08825553	0.08850027	65595895	65610046	72229988	72229988	0.96407743	2	1191338.36	89.0097562	1.5157001	34.30811	0.7514862	0.50297246	0.874273732	2.6437355	sub	1	sub:1	sub	DUP
7	72750118	72941901	NA	191784	1778	4.58108021	1772	16	441	mappable	0.62826361	NA	NA	0.565163745804	0.04545454545	1.08455432682	0.11396581	0.15942036	72750118	72750118	72939939	72941901	NA	missing	1435620.56	116.1858288	1.9658000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
7	72941902	74139961	DUP	1198060	8487	4.23905493	8436	350	1943	mappable	0.58966581	NA	NA	0.510878433294	0.00249376559	0.93974227309	0.09904781	0.10154158	72941902	72950044	74139961	74139961	0.98795013	2	1285602.14	101.5667388	1.8209879	30.81587	0.7942645	0.58852908	0.872123906	3.3669310	sub	1	sub:1	sub	DUP
7	75160045	76059952	NA	899908	8433	3.51800921	8368	347	2083	mappable	0.52500000	6	NA	0.458918360408	0.00242718447	0.64935432682	0.10111521	0.10354239	75160045	75160045	76059952	76059952	0.98620252	2	1191338.36	89.0097562	1.5157001	34.30811	0.7514862	0.50297246	0.874273732	2.6437355	sub	1	sub:1	sub	DUP
7	76810004	81739981	NA	4929978	72356	3.51800921	72175	3150	19189	mappable	0.50187129	6	NA	0.434943360408	0.00030021015	0.62305432682	0.08995577	0.09025598	76810004	76810004	81739942	81739981	0.94022469	2	1191338.36	89.0097562	1.5157001	34.30811	0.7514862	0.50297246	0.874273732	2.6437355	sub	1	sub:1	sub	DUP
7	81739982	81750019	NA	10038	147	3.71994763	146	0	41	mappable	NA	NA	NA	0.089413097250	1.00000000000	0.71995432682	0.15045304	1.15045304	81739982	81740021	81749967	81750071	NA	missing	1267967.00	NA	1.6012000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
7	81750019	99164932	NA	17414914	224213	3.51800921	223346	8666	58657	mappable	0.48886463	6	NA	0.417818360408	0.00010489877	0.62985432682	0.08314688	0.08325178	81749967	81750071	99159733	99164932	0.97491697	2	1191338.36	89.0097562	1.5157001	34.30811	0.7514862	0.50297246	0.874273732	2.6437355	sub	1	sub:1	sub	DUP
7	99164933	99199946	NA	35014	381	3.21923423	381	0	137	mappable	NA	NA	NA	NA	Inf	0.50795432682	0.13248855	Inf	99164933	99170132	99199826	99199946	NA	missing	1097293.14	NA	1.3892000	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
7	99199947	159119808	NA	59919877	793501	3.51800921	789814	36860	199575	mappable	0.49315000	6	edge	0.423851824091	0.00002466274	0.65484155519	0.07740977	0.07743443	99199947	99200067	159119808	159119808	0.96324176	2	1191338.36	89.0097562	1.5157001	34.30811	0.7514862	0.50297246	0.874273732	2.6437355	sub	1	sub:1	sub	DUP
8	170012	3709986	NA	3539982	91055	1.92355540	90233	4614	21789	mappable	0.07487500	4	edge	0.006237904874	0.00018402650	0.05411048676	0.09193158	0.09211560	170012	170012	3709960	3710012	0.27745980	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
8	3709986	4069914	NA	359929	15955	2.02648247	15889	1024	3986	mappable	0.06866552	1	self	0.000613690874	0.00091743119	0.02514567318	0.10835790	0.10927533	3709960	3710012	4069814	4070014	0.27554701	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
8	4069914	6205015	NA	2135102	69809	1.92355540	69649	4057	17853	mappable	0.07039231	4	NA	0.001953442970	0.00023713540	0.03740421578	0.09512090	0.09535803	4069814	4070014	6199958	6210072	0.25171572	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
8	6205015	6229977	NA	24963	681	2.16958046	680	6	187	mappable	0.06604776	8	NA	0.015060744070	0.14285714286	0.04185432682	0.13691593	0.27977308	6199958	6210072	6229954	6229977	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
8	6229978	6459946	NA	229969	5608	1.92355540	5591	185	1443	mappable	0.07865132	4	NA	0.005951255145	0.00495049505	0.03714567318	0.11228965	0.11724015	6229978	6230001	6459851	6460041	0.32123170	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
8	6459946	6560011	NA	100066	2676	2.02648247	2672	41	699	mappable	0.06364677	1	self	0.001931639592	0.02222222222	0.00294567318	0.12040510	0.14262732	6459851	6460041	6559973	6560011	0.27074537	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
8	6560012	6919904	NA	359893	8194	1.92355540	8146	585	1925	mappable	0.07599286	4	NA	0.004799939355	0.00157977883	0.05824567318	0.10835875	0.10993853	6560012	6560050	6919904	6919904	0.29518748	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
8	8100000	9639966	NA	1539967	32852	1.92355540	32760	1541	8264	mappable	0.07116325	4	NA	0.002393360408	0.00061236987	0.03134567318	0.09730245	0.09791482	8100000	8100000	9639932	9639966	0.29200977	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
8	9639967	11749944	NA	2109980	44799	2.02648247	44662	2081	10986	mappable	0.07584022	1	self	0.009911013486	0.00045085663	0.05337716049	0.09519821	0.09564907	9639967	9640001	11749885	11749944	0.27863752	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
8	11749945	11859985	NA	110041	1756	1.92355540	1752	175	376	mappable	0.06884796	4	NA	0.000366319592	0.00558659218	0.06054567318	0.11941951	0.12500611	11749945	11750004	11859985	11859985	0.31900673	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
8	12580042	43789991	NA	31209958	518782	2.02648247	516907	23537	132610	mappable	0.06502500	1	self	0.001392136199	0.00003935149	0.02032318985	0.08033579	0.08037515	12580042	12580042	43789991	43789991	0.14953434	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
8	46880007	103790427	NA	56910423	766518	2.02648247	763914	33091	199926	mappable	0.06845000	1	self	0.001062002828	0.00002801591	0.00043180997	0.07763315	0.07766117	46880007	46880007	103790338	103790427	0.15231913	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
8	103790428	103790736	DUP	309	2	3.09211372	1	0	0	mappable	NA	9	NA	0.316133745023	1.00000000000	0.44035432682	0.24179519	1.24179519	103790428	103790518	103790713	103790736	NA	missing	1023415.67	NA	1.3353777	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
8	103790737	103827116	ITX	36380	504	2.96483474	500	22	126	mappable	0.27692545	3	NA	0.225104959507	0.03846153846	0.38635432682	0.13200573	0.17046726	103790737	103790744	103827095	103827116	NA	missing	1004421.01	66.2942800	1.2814883	NA	NA	NA	NA	NA	NA	NA	NA	NA	DUP
8	103827117	115890036	ITX	12062920	163646	2.02648247	163208	8787	42905	mappable	0.06700000	1	NA	0.000970528481	0.00010840108	0.01405432682	0.08501928	0.08512768	103827117	103827241	115889935	115890036	0.13992058	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
8	115890037	115899976	NA	9940	157	2.19253557	157	0	42	mappable	NA	NA	NA	NA	Inf	0.07325432682	0.15061341	Inf	115890037	115890138	115899919	115899976	NA	missing	765052.50	NA	0.9545000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
8	115899977	144639996	NA	28740024	439752	2.02648247	437828	22505	108724	mappable	0.06910000	1	NA	0.000067415925	0.00004093663	0.00031184480	0.08072146	0.08076240	115899977	115900034	144639956	144639996	0.15155407	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
8	144639997	144649984	NA	9988	216	2.15403732	216	0	29	mappable	NA	NA	NA	NA	Inf	0.05695432682	0.15053462	Inf	144639997	144640037	144649968	144649984	NA	missing	563477.80	NA	0.9382000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
8	144649985	146030028	NA	1380044	15168	2.02648247	15065	562	3208	mappable	0.07449524	1	NA	0.006818360408	0.00150829563	0.00474567318	0.09805708	0.09956538	144649985	144650001	146029996	146030060	0.18601448	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
8	146030028	146289988	NA	259961	3456	2.16958046	3454	6	901	mappable	0.05241946	8	edge	0.015475030397	0.12500000000	0.06835432682	0.11118563	0.23618563	146029996	146030060	146289988	146289988	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
9	200101	14515809	NA	14315713	278448	2.02648247	277676	16405	71673	mappable	0.06759915	1	edge	0.000507840501	0.00005821738	0.00057826845	0.08413579	0.08419401	200101	200101	14515726	14515809	0.13352254	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
9	14515810	14521752	INV	5943	104	2.14472948	100	0	30	mappable	NA	7	NA	0.101261309126	0.25000000000	0.01774567318	0.15952811	0.40952811	14515810	14515857	14521741	14521752	NA	missing	712108.32	NA	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
9	14521753	14522011	INV	259	6	1.95965660	6	0	2	mappable	NA	NA	NA	NA	Inf	0.02534567318	0.24947584	Inf	14521753	14521756	14521984	14522011	NA	missing	731139.00	NA	0.8559000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
9	14522012	14522194	INV	183	5	1.95965660	5	0	1	mappable	NA	NA	NA	NA	Inf	0.02534567318	0.26610962	Inf	14522012	14522070	14522175	14522194	NA	missing	731139.00	NA	0.8559000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
9	14522195	38769828	INV	24247640	367167	2.02648247	366037	15746	94484	mappable	0.06980714	1	NA	0.000824303878	0.00005926277	0.00326836512	0.08152836	0.08158762	14522195	14522286	38769828	38769828	0.14625685	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
9	66840048	66849972	NA	9925	540	2.02648247	503	0	282	mappable	NA	1	self	0.004428657722	0.02702702703	0.00035432682	0.15063813	0.17766515	66840048	66840048	66849972	66849972	NA	missing	693452.99	NA	0.8841938	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
9	68410004	68419976	NA	9973	1130	2.15970577	1047	0	288	mappable	NA	NA	NA	0.215345203344	0.01204819277	0.05935432682	0.15055919	0.16260739	68410004	68410004	68419976	68419976	NA	missing	4755848.00	NA	0.9406000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
9	71030093	90620048	NA	19589957	269426	2.02648247	268508	12950	68833	mappable	0.06845000	1	NA	0.000069087805	0.00007210845	0.00452594977	0.08256407	0.08263618	71030093	71030093	90619958	90620048	0.12761096	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
9	90620049	90670061	NA	50013	309	2.12097134	309	0	90	mappable	NA	NA	NA	NA	Inf	0.04295432682	0.12812287	Inf	90620049	90620139	90669991	90670131	NA	missing	685868.32	NA	0.9242000	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
9	90670061	99809990	NA	9139931	114798	2.02648247	114376	5146	28337	mappable	0.06845000	1	NA	0.000223614109	0.00017959770	0.00698575402	0.08649115	0.08667075	90669991	90670131	99809975	99809990	0.14462457	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
9	99809991	99934999	NA	125009	290	2.16958046	290	8	60	mappable	0.07790422	8	NA	0.009422581955	0.12500000000	0.13175432682	0.11812182	0.24312182	99809991	99810006	99829998	99934999	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
9	99935000	100119998	NA	184999	1221	1.92355540	1216	109	292	mappable	0.07831990	4	NA	0.011732646122	0.00877192982	0.04274567318	0.11430428	0.12307621	99935000	100040001	100119994	100120002	0.18275471	1	634797.79	33.2302685	0.8406149	NA	NA	0.00000000	0.961777699	0.9617777	1	1	1:1	2	TCNneutral
9	100119998	113370026	NA	13250030	192227	2.02648247	191615	10343	48731	mappable	0.06872500	1	self	0.000163911363	0.00009128252	0.02733892888	0.08453267	0.08462395	100119994	100120002	113369968	113370026	0.21181160	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
9	113370027	116840151	NA	3470125	47188	2.16958046	46914	2682	11687	mappable	0.06655000	8	NA	0.001635477126	0.00033829499	0.04604736742	0.09205324	0.09239154	113370027	113370085	116840086	116840151	0.18284214	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
9	116840152	116863149	DUP	22998	404	2.16958046	404	27	96	mappable	0.08888106	8	NA	0.020399416645	0.03703703704	0.05955432682	0.13803365	0.17507068	116840152	116840204	116863142	116863149	NA	missing	729901.36	38.2604611	0.9447809	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
9	116863150	118950011	DUP	2086863	31272	2.02648247	31180	1084	7877	mappable	0.06820921	1	self	0.000856610627	0.00085034014	0.04941993503	0.09527029	0.09612063	116863150	116863207	118949998	118950011	0.16165184	1	693452.99	35.7876681	0.8841938	NA	NA	0.00000000	1.013241235	1.0132412	1	1	1:1	2	TCNneutral
9	118950012	123260103	NA	4310092	63033	2.16958046	62838	2322	16079	mappable	0.06667674	8	NA	0.003456639592	0.00039729837	0.05245432682	0.09074704	0.09114433	118950012	118950025	123259962	123260244	0.15230427	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
9	123260103	123280013	NA	19911	225	2.14472948	224	4	72	mappable	0.06710000	7	NA	0.092121409189	0.20000000000	0.00745432682	0.14004349	0.34004349	123259962	123260244	123279982	123280013	NA	missing	712108.32	38.4491405	0.9342591	NA	NA	NA	NA	NA	NA	NA	NA	NA	TCNneutral
9	123280014	141019791	NA	17739779	241817	2.16958046	240358	9575	56209	mappable	0.06845000	8	edge	0.000028754956	0.00009064540	0.05963068125	0.08305481	0.08314545	123280014	123280045	141019791	141019791	0.16251697	1	729901.36	38.2604611	0.9447809	NA	NA	0.00000000	1.084790228	1.0847902	1	1	1:1	2	TCNneutral
X	2724856	55948004	NA	53223149	467975	1.25734634	467975	446	754	mappable	0.09927500	NA	NA	NA	NA	NA	NA	NA	2724856	2740111	55947989	55948004	0.21088466	1	429799.65	19.4733271	1.0909000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	55948005	58499983	CTX	2551979	22767	1.03025392	22767	9	36	mappable	0.15407500	NA	NA	NA	NA	NA	NA	NA	55948005	55948097	58499983	58499983	NA	missing	355524.42	14.7113555	0.8986000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	61750000	63850065	NA	2100066	21103	1.03013582	21103	6	29	mappable	0.09220000	NA	NA	NA	NA	NA	NA	NA	61750000	61750000	63849996	63850134	NA	missing	357108.01	15.9817302	0.8985000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	63850065	63859981	NA	9917	126	0.90779170	126	0	0	mappable	NA	NA	NA	NA	NA	NA	NA	NA	63849996	63850134	63859899	63859981	NA	missing	344158.00	NA	0.7949000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	63859982	63900020	NA	40039	299	1.12366531	299	0	0	mappable	NA	NA	NA	NA	NA	NA	NA	NA	63859982	63860064	63899943	63900097	NA	missing	360768.26	NA	0.9777000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	63900020	70849979	NA	6949960	59619	1.02316835	59619	49	77	mappable	0.19527500	NA	NA	NA	NA	NA	NA	NA	63899943	63900097	70849834	70849979	0.06025068	1	347927.17	17.3963587	0.8926000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	70849980	71095033	NA	245054	385	1.11339124	385	0	0	mappable	NA	NA	NA	NA	NA	NA	NA	NA	70849980	70850125	71079995	71110071	NA	missing	348774.14	NA	0.9690000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	71095033	88459980	NA	17364948	164281	1.03356052	164281	139	287	mappable	0.29450000	NA	NA	NA	NA	NA	NA	NA	71079995	71110071	88459980	88459980	0.27275748	1	357126.37	15.6242787	0.9014000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	88990017	89349936	NA	359920	1088	1.02375881	1088	0	1	mappable	NA	NA	NA	NA	NA	NA	NA	NA	88990017	88990017	89349936	89349936	NA	missing	352648.42	NA	0.8931000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	89349937	90140198	NA	790262	0	0.00000000	0	0	NA	mappable	NA	NA	NA	NA	NA	NA	NA	NA	89349937	89349937	90140198	90140198	NA	missing	NA	NA	0.0000000	NA	NA	0.00000000	0.000000000	0.0000000	0	0	0	0	HomoDel
X	90140199	91529952	NA	1389754	5101	1.02045222	5101	1	8	mappable	0.10000000	NA	NA	NA	NA	NA	NA	NA	90140199	90140199	91529952	91529952	NA	missing	352697.35	15.8713808	0.8903000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	91529953	92379999	NA	850047	0	0.00000000	0	0	NA	mappable	NA	NA	NA	NA	NA	NA	NA	NA	91529953	91529953	92379999	92379999	NA	missing	NA	NA	0.0000000	NA	NA	0.00000000	0.000000000	0.0000000	0	0	0	0	HomoDel
X	92380000	120709977	NA	28329978	255716	1.02045222	255716	212	437	mappable	0.22942500	NA	NA	NA	NA	NA	NA	NA	92380000	92380000	120709955	120709977	0.15319585	1	352381.57	15.1020674	0.8903000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	120709978	120749990	NA	40013	408	1.10571521	408	0	0	mappable	NA	NA	NA	NA	NA	NA	NA	NA	120709978	120710000	120749906	120749990	NA	missing	372676.50	NA	0.9625000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
X	120749991	154929639	NA	34179649	311086	1.00911531	311086	346	560	mappable	0.18147500	NA	NA	NA	NA	NA	NA	NA	120749991	120750075	154929639	154929639	0.07773247	1	346984.44	17.3492222	0.8807000	NA	NA	NA	NA	NA	1	NA	1	1	TCNneutral
Y	2653090	2919837	NA	266748	293	0.02705572	293	0	2	mappable	NA	NA	NA	NA	NA	NA	NA	NA	2653090	2653090	2919837	2919837	NA	missing	19345.29	NA	0.0491000	NA	NA	NA	NA	NA	0	NA	0	0	HomoDel
Y	3712028	3719919	NA	7892	141	0.48088629	141	123	3	mappable	0.90328953	NA	NA	NA	NA	NA	NA	NA	3712028	3712028	3719919	3719919	0.98375997	2	361630.00	34.1539444	0.4334000	NA	NA	NA	NA	NA	0	NA	0	0	HomoDel
Y	6420014	10069977	NA	3649964	6072	0.02622907	6072	32	42	mappable	0.98474773	NA	NA	NA	NA	NA	NA	NA	6420014	6420014	10069977	10069977	0.93733460	2	19039.45	1.8219989	0.0484000	NA	NA	NA	NA	NA	0	NA	0	0	HomoDel
Y	13130467	13560035	NA	429569	1359	0.42679979	1359	58	75	mappable	0.93125000	NA	NA	NA	NA	NA	NA	NA	13130467	13130467	13479989	13560035	0.77486669	2	223886.55	18.8607461	0.3876000	NA	NA	NA	NA	NA	0	NA	0	0	HomoDel
Y	13859965	13935606	NA	75642	686	0.47167505	686	40	52	mappable	0.78432059	NA	NA	NA	NA	NA	NA	NA	13859965	13860001	13869981	13935606	0.87299161	2	268595.56	23.6312440	0.4256000	NA	NA	NA	NA	NA	0	NA	0	0	HomoDel
Y	13935607	19558992	NA	5623386	5696	0.02575670	5696	4	4	mappable	0.73911429	NA	NA	NA	NA	NA	NA	NA	13935607	14001232	19558992	19558992	NA	missing	18936.49	0.2536136	0.0480000	NA	NA	NA	NA	NA	0	NA	0	0	HomoDel
Y	20802956	23808171	NA	3005216	2840	0.02599289	2840	8	13	mappable	1.00005000	NA	NA	NA	NA	NA	NA	NA	20802956	20802956	23808171	23808171	NA	missing	19041.76	0.7934068	0.0482000	NA	NA	NA	NA	NA	0	NA	0	0	HomoDel
Y	24381338	24508205	NA	126868	228	0.02528433	228	0	0	mappable	NA	NA	NA	NA	NA	NA	NA	NA	24381338	24381338	24508205	24508205	NA	missing	18633.09	NA	0.0476000	NA	NA	NA	NA	NA	0	NA	0	0	HomoDel
Y	28780461	28789809	NA	9349	78	0.42927974	78	2	8	mappable	0.57951540	NA	NA	NA	NA	NA	NA	NA	28780461	28780461	28789809	28789809	NA	missing	267705.71	10.8938010	0.3897000	NA	NA	NA	NA	NA	0	NA	0	0	HomoDel
