3f2ab643573a3a117ef1d45df8502a5c *DESCRIPTION
ae74b785cbb4120e921a94ae05cd1bff *LICENSE
08c88ca8049765484c9866b778695685 *NAMESPACE
6aa055a21e6d6eed012f6f24b0b1d57c *NEWS
75da0714653368bccdec5f3392d06cf7 *R/AllClasses.R
a8bc70f12e50a833fdef2a58401c694e *R/MACSr-package.R
c884137e26e43f2bd0023798b7936540 *R/basilisk.R
00344b52b2c47d08fc1a14e487d3e271 *R/bdgbroadcall.R
b891d9e741c8a4ba545ee20d5d590f15 *R/bdgcmp.R
4b103304d83b561a3713b61450f7dbcd *R/bdgdiff.R
bbb7c5330ccf342d943280d9bc7a60aa *R/bdgopt.R
1d3498f083ff7243ed217c72b5b2face *R/bdgpeakcall.R
483df21f6df7f0dc2e6a4351ab331c65 *R/callpeak.R
3dcf383865ab00cbe713bffa58495e7a *R/callvar.R
62776354089c1aa4d3d90b269bd110bd *R/cmbreps.R
aef9172711aac22ac3e2920aae4703d9 *R/filterdup.R
c5c65a6d1b590af529cccdab06804929 *R/hmmratac.R
bf7a357aff4551d6460801305d75719d *R/pileup.R
1820b245da40678dd782a0b4bedc26d8 *R/predictd.R
c831068424f8e5eecaa206a602a3876a *R/python.R
13aba4c895560b4bf293558098c219bf *R/randsample.R
e6eb399dc0625c6e37c1c974d66ca827 *R/refinepeak.R
a64591b876e9f0aa008539f61e94f2c8 *README.md
e0fd02bbc641f41a6f2acbe1b20c2ac2 *build/vignette.rds
357dd961172bf0191dac7d051404333f *configure
ed47872bb5a5206265037af0d4b1e3e2 *configure.win
e6216802133c8d34b6c73463ab8182b0 *inst/CITATION
08d5759170682d68def30a1fb54c2cc0 *inst/doc/MACSr.R
063e2c8f7f3430c85724ac91a81c918a *inst/doc/MACSr.Rmd
6904287686a14d174845fcc0d3faa7c5 *inst/doc/MACSr.html
4c465b76be255b472bd9e583a492a211 *inst/extdata/CTCF_PE_CTRL_chr22_50k.bam.bai
b15e8256224fb2dbf918278d046f20fc *inst/extdata/CTCF_PE_CTRL_chr22_50k.bedpe.gz
c7de9e20c9772a99f831296bac249355 *inst/extdata/CTCF_PE_ChIP_chr22_50k.bam.bai
4f06a20265a60a416c66876a4bfc00c7 *inst/extdata/CTCF_PE_ChIP_chr22_50k.bedpe.gz
85e0f7ed6f6e0634293034b221469c19 *inst/extdata/CTCF_SE_CTRL_chr22_50k.bed.gz
824a646360a3a5415c3a8abd54fa7cf1 *inst/extdata/CTCF_SE_ChIP_chr22_50k.bed.gz
04d37f903c8eac0c8e73ccc61c24d850 *inst/extdata/callvar_testing.narrowPeak
29ab3e4765b80ad1bc9edca344a3e1c3 *inst/extdata/run_callpeak_bampe_broad_peaks.broadPeak
fbec726fa3df70029b72a78d20c86659 *inst/extdata/run_callpeak_bampe_narrow_peaks.narrowPeak
1ede84147318ea9e26b9b8c9600d1ec7 *inst/extdata/run_callpeak_bedpe_broad_peaks.broadPeak
7368215012da5fa48ff92485cef9b50e *inst/extdata/run_callpeak_bedpe_narrow_peaks.narrowPeak
35baa5279ebfd2132170ef2ab5b8bb60 *inst/extdata/run_callpeak_broad_peaks.broadPeak
6a1bad06b20a511d6885813d21e8e48b *inst/extdata/run_callpeak_narrow0_peaks.narrowPeak
74026b3842e42d11deb9f4107c242da9 *inst/extdata/run_callpeak_narrow0_treat_pileup.bdg
473181a84d192e02c8c2be24a87863e7 *inst/extdata/run_callpeak_narrow1_peaks.narrowPeak
52ef0fa77badf4c7b9431a7a146f0731 *inst/extdata/run_callpeak_narrow2_peaks.narrowPeak
172b1b6f0c0053dee9354b9f52efa865 *inst/extdata/run_callpeak_narrow3_peaks.narrowPeak
cc4f02b2fc1462abd9679447664b4d92 *inst/extdata/run_callpeak_narrow4_peaks.narrowPeak
e4ab883586afe8d0703af2266da97dcf *inst/extdata/run_callpeak_narrow5_peaks.narrowPeak
c304afe4ccf40a278690ea4c49769875 *inst/extdata/run_callpeak_narrow_revert_control_lambda.bdg
4f6a9ddd2578160a5f86642028eb951c *inst/extdata/run_callpeak_narrow_revert_treat_pileup.bdg
858c6b4840f1fafa829e3e741b7eb982 *inst/extdata/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak
0d626b48a95e55fd6255c826402c4c33 *inst/extdata/run_filterdup_result.bed.gz
73174ffbc8c6b5d4db553f85a72176b3 *inst/extdata/run_pileup_CTRL.bed.bdg
7475f076083e476aad2e63e049605657 *inst/extdata/run_pileup_ChIP.bed.bdg
ae98e6f34487cc08c7dd0a29fc40d6de *man/MACSr.Rd
3b5a06051ddb60bd2690a8d917b56dca *man/bdgbroadcall.Rd
238f2deb0d6e2d988889f9d688055d9f *man/bdgcmp.Rd
67c81b6a1a7d6a172b934a9844f064fe *man/bdgdiff.Rd
c428840ee511202030ca55cd6fa676df *man/bdgopt.Rd
2d17a6021f226217cf8e435240530077 *man/bdgpeakcall.Rd
25894067978ae593c44737fad41718b0 *man/callpeak.Rd
e323555cfd1ace0cf37b93a8edd7a646 *man/callvar.Rd
c943c464da9babceddde3a6eaf2fb671 *man/cmbreps.Rd
564df2a967fc5e578b434fca4d81a55a *man/filterdup.Rd
76f3da08d3df620c6eee1ce38dd23935 *man/hmmratac.Rd
38112aa061d94585f070780f97e444b1 *man/macsList-class.Rd
5c63ad819965168587c74052daafac5a *man/pileup.Rd
f6bf2f863e070f0ad2c5436c6b3cbb88 *man/predictd.Rd
e11d4c3721e4bb20fb8919b74c617205 *man/randsample.Rd
5095053994077f979b6d9a8cb3aadec1 *man/refinepeak.Rd
0e763df95fb8c0b6cbd819fe8f95a2b7 *tests/testthat.R
a5be941c8ccd2d7eaf024496514def05 *tests/testthat/test-init.R
e90c92efcd99b661a9a9810ade53b1b7 *tests/testthat/test.py
063e2c8f7f3430c85724ac91a81c918a *vignettes/MACSr.Rmd
