c04accd7894fd92570a3f2eb6dd91985 *DESCRIPTION
c59b0224eb31f179acdec40bf47e1cd6 *NAMESPACE
89d99031f0177cede8dba18c714741fb *NEWS
ca849190de19119d6299e28b3c5d46ae *R/functions.R
2f32b3e264330b65c25d18a3b7dd3e67 *R/globals.R
6f45cdfb59cd237fa212de731982db68 *R/runTraianProt.R
f85ab447acbc2ee00f85f0fa024316cf *README.md
832e29697489a85b7fba81acf52b93a4 *build/vignette.rds
8b9306c00e103d75e8bed362d0a6e0f4 *inst/doc/TraianProt.R
9114b7582fde2e8ae3a6dce738ce71a8 *inst/doc/TraianProt.Rmd
2407336788aa4aec6597ab9c50ca250b *inst/doc/TraianProt.html
1c86962458ef52edd260c1750ce6b6bf *inst/extdata/Downstreaming_Analysis_report.Rmd
08c32d00796d7b4f480d58594d361134 *inst/extdata/metadata_MaxQuant.tsv
1666fa2a278ff0e327a772de869a0d85 *inst/extdata/proteinGroups.txt
aaf367813d1ebc887b44cfd87a709cd5 *inst/extdata/traianprot.png
a017b2fc7e43beee5f2937a519f91c3a *inst/script/make-data.R
07214d40cd97bb02bc21d528edf47dfa *man/Diferential_boxplot.Rd
9bb9e969ae197cc87978cf679dc0292c *man/Goterms_finder.Rd
b875dd3509e14c9262f0d7578d7ad9af *man/barplot_func.Rd
f3661157f39b9d84dbac706bde69eb39 *man/boxplot_function.Rd
ed0e3cbc421cea4c197b449135ccd24d *man/collapse_technical_replicates.Rd
1cbc8617a6dcedb3619caab757e598aa *man/corrplot_function.Rd
a1bca2a2550edb3365a6740e47543547 *man/dotplot_func.Rd
3b89f04439429b56d614519077be0530 *man/filter_valids.Rd
dc21586e20c96ebc066b782511c53c84 *man/gostplot_func.Rd
385ec0a73393bbc076d4b55926ed934e *man/histogram.Rd
6da8cdfa50cc70050f6507cdf7de061a *man/identify_proteins.Rd
ecbe812f01ed14ae5d94b7603740c1a6 *man/igraph_analysis.Rd
34b0f0f60b2304d4a767771c4d54901a *man/impute_KNN_data.Rd
1b3c83023350e115358ced699f03364b *man/impute_data.Rd
f5ac54d97d7756ed213b151801010aa4 *man/interactions_down.Rd
3e73098b4f70491291112caa1ac2606f *man/interactions_up.Rd
710dde42998cf738aec22981d2bf04fe *man/median_centering.Rd
336a0ea48cf9824d3b0a3908b00b6712 *man/my_heatmap.Rd
81348284221e52eda8b7bd9d365ae9af *man/my_heatmap_differential.Rd
dcf9f31f25d7c0ac6468d773b509c63f *man/normalization_func.Rd
a0078bfae9061d897b26ca980d3b7880 *man/obtain_LOG.names.Rd
3eb96089e3c5e6f4cdbf32e037bc5b65 *man/obtain_unique_proteins.Rd
b4ec903047a968cdd17edaff23149c8e *man/pca.Rd
04cb966e3ca1f5da0bcc47369b1ded50 *man/plotCV2.Rd
6c33f9d330c8ccd9f2178e53e01fd33e *man/postimputation_state.Rd
3fa86ddf00371671a28dc5e10aa190fc *man/preimputation_state.Rd
886e7fd639078b0375b891dac4420e97 *man/qqplot_function.Rd
7d4279ca4aff736338bfd878b78c837a *man/quick_filtering.Rd
9a8038716a81fc2bdc017013690c9baf *man/runTraianProt.Rd
c721e599841963675d62bd9febc011ec *man/scatterplot_function.Rd
915e68cd7f8a001a29a37688b815987a *man/statistical_analysis.Rd
70cb5ef198de14f8eabcf4ebeabee3c0 *man/traian_to_SE.Rd
db172746c3e59910e07b20cc76650a68 *man/traianprot_power_curve.Rd
75eddac9612966c03e5962bbc32d1fc5 *man/tsne.Rd
a1ad3fe3b7164f5266f8d13a3a731a24 *man/unique_peptides_filter.Rd
4701d8f36e963be39d9e654aeff930d3 *man/venn_diagram.Rd
ca6ae5b7589a0a6e0d5dfda8a49179e0 *man/volcano_plot.Rd
c2468ee4b964432916ede17c48b4399f *man/volcano_plot_tiff.Rd
b0f70e5206be881b83f264116e270df5 *tests/testthat.R
544a84da5519b3021b66ea85adc7a4ab *tests/testthat/test-fun_boxplot_function.R
8d2edb48f7d115af6353a2a19f7c3099 *tests/testthat/test-fun_corrplot_function.R
8a1535b97a1cb95982c7ba79a77a8185 *tests/testthat/test-fun_identify_proteins.R
9ae7fda7fe385c5dfd6d226d23043a78 *tests/testthat/test-fun_impute_data.R
9f840b6a63e422dd1d5818c261c20b76 *tests/testthat/test-fun_mean_centering.R
6f9fe78deff6887fb588473ca46aa67d *tests/testthat/test-fun_my_heatmap.R
368db7249cfd3f7116d6ae3f13c0db19 *tests/testthat/test-fun_my_heatmap_diferential.R
8adb7747bd821c61dbce078478bba016 *tests/testthat/test-fun_normalization_function.R
868fb119e2c742dd7fbcf215f3a583d0 *tests/testthat/test-fun_obtain_LOG_names.R
74029949b9ebb59ef164b05ffc176e85 *tests/testthat/test-fun_obtain_unique_proteins.R
438e4545d591edfc31be5720393e6905 *tests/testthat/test-fun_pca_function.R
fe43df893e135b4dbfa96349f2abe04a *tests/testthat/test-fun_power_curve_traianprot.R
44344868b749ebb6be6b0f661ca0df75 *tests/testthat/test-fun_quick_filtering.R
a4a79bdc6a5c6695498c55e4e8344f21 *tests/testthat/test-fun_tsne.R
2f971f68392e6e3fdf03bd7392491b66 *tests/testthat/test-fun_unique_peptides_filter.R
9114b7582fde2e8ae3a6dce738ce71a8 *vignettes/TraianProt.Rmd
