eb5f893e091747af308a48af4610c97e *DESCRIPTION
132afc3d460c4b2b225ea1d12b36e25e *NAMESPACE
a3a017dbc3b49af0c037612d447bf514 *NEWS.md
14812de75bcb0b7a53c6981b4140669a *R/CVnorm.R
f97d160ea8eceddfd328d052512a1ce8 *R/bcvBackground.R
4faa28edd05b8784229e2a3228484db2 *R/betterChromVAR.R
fc3366aa4714eeed69db354af438f266 *R/computeBackgrounds.R
b8322dc504388b0fe31b950e54c3cd7d *R/computeDeviationsAnalytic.R
c6d476b06b5de20483c882d2c1f1b6dc *R/computeDeviationsFromKNN.R
32971fa8fa888606ea800038e67ef3d3 *R/computeDeviationsWeighted.R
d4cb89498e7ec743cefed0a8edadf15c *R/computeMotifReliability.R
dea9b487c713dc01e299d965e30bcde8 *R/computeVariability.R
6900b106c4e61894d5f7da4c7308afb9 *R/estimateNoiseKappa.R
980cc3bcbf110c959ff6bb7459683fcf *R/getBackgroundBins.R
197d22000a8abd663ca2f4f474787792 *R/getBackgroundKNN.R
1d8604b2479661dbb72240c7ae4a2ba4 *R/smoothDeviationsKNN.R
04d92184588442d7a0fb5974ee955aad *R/utils.R
1ad7f00d25b986865ce43405f121da02 *README.md
37e642a8c2caf1e2c0f417f7286f590c *build/vignette.rds
5a69d2cc9133f5a54e83357d39c603b8 *inst/CITATION
320463a7d51c58dd1273f091b7131763 *inst/REFERENCES.bib
1bcaf5c766d71eb3c0a9c7b222176735 *inst/doc/betterChromVAR.R
3a33e0885920b2815d6b5781f20fac45 *inst/doc/betterChromVAR.Rmd
94f6d451dc33287c85c235755db1ea73 *inst/doc/betterChromVAR.html
f9dd4d139144f443e07d2751efa7ce8c *man/CVnorm.Rd
08f70ae996e8993ee26816478bf47c6a *man/addGCBias.Rd
45e338643422dee3cf4c8653ed77ca4b *man/bcvBackground-class.Rd
16069a57341ddff560141a9fd3f0ba3b *man/bcvBackground-methods.Rd
be7c88eca510a44390b4aa7112f435aa *man/betterChromVAR.Rd
15327269b4b2d12ff2df7c287d4b84b8 *man/computeBackgrounds.Rd
74a682d48300147a9560a20b5983a895 *man/computeDeviationsAnalytic.Rd
db6bc3167e6df6183119590b9a469db9 *man/computeDeviationsFromKNN.Rd
fa886da3d6defc2c928fe8a3f4f38b2d *man/computeDeviationsWeighted.Rd
8457a0d982d6df4b379c40e45f3419cf *man/computeMotifReliability.Rd
3260083f7ab7a8bb9ceec2ab71df9ac4 *man/computeMotifVariability.Rd
94cf5cf9257821fde0cc5aed92d243ef *man/estimateNoiseKappa.Rd
6cb1623aa8584628f41af352d5011c43 *man/getBackgroundBins.Rd
f87bb9930d0b6d2dd7acad350aa7e11a *man/getBackgroundKNN.Rd
40f2e24be75492a31626e2aaf797b90e *man/getDummyData.Rd
ca270f0d4007ac6eb39ee0777fb7cd99 *man/getExpectation.Rd
3ed733fa39ec577ee0f2f7d6dbf44640 *man/normalizeDevsForSize.Rd
ea85da68626838384f10ac89abcd5cec *man/sampleBackgroundPeaks.Rd
0ad5d5b0d341789ee51e0883b7afd326 *man/shrinkColumnProps.Rd
d4698a2c1d3cd96cef250a6700bad146 *man/smoothDeviationsKNN.Rd
79913af12ad8d7e593a416962c7feb4e *tests/testthat.R
6c658e5a2cda7a5ca63cd8ea620ce62b *tests/testthat/test-CV.R
8de36ee9d7fb11dfa1d5ef8d6b0965c0 *tests/testthat/test-backgrounds.R
587490bac3b121c6428a5025a0b22b0e *tests/testthat/test-knn.R
eeefbc9a860d7f75e04878ada74ede60 *tests/testthat/test-smoothing.R
3a33e0885920b2815d6b5781f20fac45 *vignettes/betterChromVAR.Rmd
