3517e45a8d98b8baefeb266e4262c706 *DESCRIPTION
d941ad1e50dcdd395aa0cc9a9fdc4947 *NAMESPACE
83e25403c437df2d1363591a0c7d6e64 *NEWS.md
b4fe12876c37f8a22cde06e9701eecf0 *R/eisa-package.R
36b591217c1344cd146027c92502dba9 *R/exportToGtf.R
1f9a77bdbba18143ac89d7e821655f56 *R/getFeatureRanges.R
bc0ae29406e72b8aeb416f25aac2e529 *R/getRegionsFromTxDb.R
ae83eefbba3eee6a8d72e7952c4be92b *R/getTx2Gene.R
e678c0bdcccc1ebeb0f1fd3d2977a1b9 *R/plotEISA.R
e25a5690dcad3b4506a79d81ad994e17 *R/runEISA.R
147c4cfa1a49cdc7e65bc0b8feb594cb *README.md
c7fe8476a3be7b6be7a26cd1a6b84497 *build/vignette.rds
6caf9a427edc0491e4f2240a69664a6d *inst/CITATION
26b334e66680a5456ee1c483ebd45d22 *inst/doc/eisaR.R
b0f0b13e89a31e459dc18db8357c34ee *inst/doc/eisaR.Rmd
a7a29879373094e3055991d2d2195a63 *inst/doc/eisaR.html
d78cc0e3263865ed4255ab3491f3f966 *inst/doc/rna-velocity.R
a212fe256aeea1155110be8b1b2585b9 *inst/doc/rna-velocity.Rmd
db094a46684f4bec9473b5994e242c07 *inst/doc/rna-velocity.html
4e573ffd0398e850adccd0d062380520 *inst/extdata/Fig3abc_GSE33252_rawcounts_exonic.rds
627c11fe1c14412b31f7e23dc37d74c1 *inst/extdata/Fig3abc_GSE33252_rawcounts_intronic.rds
afb1857b1c166b0973a595f60a167e3f *inst/extdata/gencode.v28.annotation.sub.gtf
91400212be50d222d86daa793b0ad473 *inst/extdata/hg19sub.sqlite
9d7b8a70e4a97ab4b3c7a433d4111df8 *inst/extdata/small_example.gtf
9699387bf95f6774bf8fa9211b90b4f2 *inst/extdata/small_example_genome.fa
f62ee5022e6abf6f620aca7f6371ed50 *inst/extdata/small_example_t2g.txt
42300fb381dc641e0979aff75765d443 *inst/extdata/small_example_txome.fa
d0e36d766199219798055523d18fe684 *inst/scripts/generate_example_data.R
257926c14dd52e809e9a9b8c285acb5d *inst/www/eisaR.png
56bf2d6594c8f4ad1d945e85ba74f760 *man/eisaR-package.Rd
20728c83e5a6fb2e63e8c5fef14ae1b0 *man/exportToGtf.Rd
622320a8635fec8e5e0ebcab53d412d2 *man/getFeatureRanges.Rd
ee11aa6be321e85e9cbab281dbfc0187 *man/getRegionsFromTxDb.Rd
44cb10abfb0b88d345c7db5ac47ade71 *man/getTx2Gene.Rd
b3003fcb69c911f13b224668a5a2f828 *man/plotEISA.Rd
cf4868c82398706a7ac6f5fc45e5eacb *man/runEISA.Rd
d7a4089d7e64eed5f008527b2b9a5d88 *tests/testthat.R
33200db79ae89a363a5cdca20113d6b0 *tests/testthat/test_getIntronAndTxSeqs.R
011dac8eafaab6090dde5fec433a9a9f *tests/testthat/test_getRegionsFromTxDb.R
a89b586e6a0beb4d7a44de7743e83534 *tests/testthat/test_plotEISA.R
db94eb9816bbb4ec41df20272fd3f030 *tests/testthat/test_runEISA.R
b0f0b13e89a31e459dc18db8357c34ee *vignettes/eisaR.Rmd
8d84a4e6f01992f1f997dcf2434ac337 *vignettes/refs.bib
a212fe256aeea1155110be8b1b2585b9 *vignettes/rna-velocity.Rmd
