citHeader("To cite immLynx in publications, please use:")

bibentry(
  bibtype  = "Article",
  title    = "Single-cell sequencing of non-infectious and viral uveitis defines distinct mechanisms in ocular inflammation",
  author   = c(
    person("Andrei", "Belean"),
    person("Shiori", "Kuramoto"),
    person("Isabel", "Risch"),
    person(c("Lynn", "M."), "Hassman"),
    person("Atsunobu", "Takeda"),
    person("Koh-Hei", "Sonoda"),
    person("Nobuyo", "Yawata"),
    person(c("Nicholas", "C."), "Borcherding"),
    person(c("Michael", "A."), "Paley")
  ),
  journal  = "Frontiers in Immunology",
  year     = "2026",
  volume   = "17",
  pages    = "1916535",
  doi      = "10.3389/fimmu.2026.1916535",
  textVersion = paste(
    "Belean A, Kuramoto S, Risch I, Hassman LM, Takeda A, Sonoda K-H,",
    "Yawata N, Borcherding NC, Paley MA (2026).",
    "\"Single-cell sequencing of non-infectious and viral uveitis defines",
    "distinct mechanisms in ocular inflammation.\"",
    "Frontiers in Immunology, 17, 1916535.",
    "doi:10.3389/fimmu.2026.1916535"
  )
)

citFooter(paste(
  "immLynx wraps several Python tools (tcrdist3, OLGA, soNNia, clusTCR,",
  "ESM-2, metaclonotypist, pyrepseq, DeepTCR and scXpand).",
  "Please also cite the original publications for the tools you use."
))
