Package: AffyRNADegradation
Type: Package
Title: Analyze and correct probe positional bias in microarray data due
        to RNA degradation
Version: 1.58.0
Date: 2023-10-17
Depends: R (>= 2.9.0), methods, affy
Suggests: AmpAffyExample, hgu133acdf
Author: Mario Fasold
Maintainer: Mario Fasold <fasold@izbi.uni-leipzig.de>
Description: The package helps with the assessment and correction of
        RNA degradation effects in Affymetrix 3' expression arrays. The
        parameter d gives a robust and accurate measure of RNA
        integrity. The correction removes the probe positional bias,
        and thus improves comparability of samples that are affected by
        RNA degradation.
License: GPL-2
Collate: AllClasses.R decayFunction.R AffyRNADegradation.R probeInfo.R
        tongs.R
biocViews: GeneExpression, Microarray, OneChannel, Preprocessing,
        QualityControl
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 12:36:07 UTC
RemoteUrl: https://github.com/bioc/AffyRNADegradation
RemoteRef: RELEASE_3_23
RemoteSha: 605a61ab4096d9681fd1a4efa79c9b92cfb51d83
NeedsCompilation: no
Packaged: 2026-04-29 18:05:50 UTC; root
Built: R 4.6.0; ; 2026-04-29 18:28:09 UTC; unix
