calcThreshold           Calculate Read Count Threshold
ce10.blacklist          A 'GRanges' object representing ENCODE signal
                        artefact or "black list" regions.
countReads              Count reads from a 'BamFile'
getKaryotype            Replace the karyotype of a 'GreyList' object
greyList                A sample 'GreyList' object for use in examples.
GreyList-class          '"GreyList"' Objects
greyListBS              Construct a grey list with default arguments
loadKaryotype           Load a karyotype from a file
makeGreyList            Generate a grey list from a 'GreyList' object
setRegions              Replace the set of regions of a 'GreyList'
                        object
