# Generated by roxygen2: do not edit by hand

export(BSmeth2Probe)
export(deconvolute)
export(findSignatures)
export(simulateCellMix)
importFrom(BiocGenerics,as.data.frame)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,makeGRangesFromDataFrame)
importFrom(IRanges,IRanges)
importFrom(IRanges,distance)
importFrom(IRanges,mergeByOverlaps)
importFrom(MASS,rlm)
importFrom(S4Vectors,'elementMetadata<-')
importFrom(S4Vectors,'mcols<-')
importFrom(S4Vectors,elementMetadata)
importFrom(S4Vectors,mcols)
importFrom(S4Vectors,runValue)
importFrom(assertthat,assert_that)
importFrom(data.table,":=")
importFrom(data.table,.SD)
importFrom(data.table,merge.data.table)
importFrom(data.table,nafill)
importFrom(data.table,setDT)
importFrom(data.table,transpose)
importFrom(dplyr,select)
importFrom(dplyr,starts_with)
importFrom(e1071,best.tune)
importFrom(foreach,"%dopar%")
importFrom(foreach,foreach)
importFrom(magrittr,"%>%")
importFrom(matrixStats,rowSums2)
importFrom(matrixStats,rowVars)
importFrom(methods,as)
importFrom(methods,is)
importFrom(methylKit,getSampleID)
importFrom(methylKit,unite)
importFrom(minfi,dmpFinder)
importFrom(minfi,logit2)
importFrom(nnls,nnls)
importFrom(quadprog,solve.QP)
importFrom(rsq,rsq.partial)
importFrom(stats,aggregate)
importFrom(stats,lm)
importFrom(stats,na.omit)
importFrom(stats,runif)
importFrom(stats,setNames)
importFrom(tidyr,drop_na)
importFrom(utils,getFromNamespace)
