example_diff_result     Output of running paired_diff on example_se.
example_gene_sets       MSigDB gene sets from humans, category C5 with
                        ensemble gene IDs
example_ora_results     Output of running paired_ora on
                        example_diff_result and gene sets extracted
                        from MSigDB
example_se              A small subset of the GEO:GSE61220 data set.
paired_diff             Run paired DESeq2 and DEXSeq analyses
paired_ora              Paired Over-Representation Analysis
plot_ora                Scatter plot of Over-Representation Analysis
                        results
prepare_msigdb          Load MSigDB and convert to names list of gene
                        sets
