add_pairdist            Appends distance between interaction anchors
anchors1                Enhanced GInteractions getters
annotate                Annotate both anchors of a GInteractions
as_ginteractions        Construct a GInteractions object from a tibble,
                        DataFrame or data.frame
dplyr-arrange           Arrange a GInteractions by a column
dplyr-count             Count or tally GInteractions per group
dplyr-filter            Subset a GInteractions with tidyverse-like
                        'filter'
dplyr-group_by          Group GInteractions by columns
dplyr-mutate            Mutate columns from a GInteractions object
dplyr-rename            Rename columns from a GInteractions with
                        tidyverse-like 'rename'
dplyr-select            Select columns within GInteractions metadata
                        columns
dplyr-slice             Slice a GInteractions rows by their index
dplyr-summarize         Summarize GInteractions per group
ginteractions-anchor    Manage GInteractions anchors with plyranges
ginteractions-count-overlaps
                        Count overlaps between a query GInteractions
                        and a GRanges
ginteractions-export    Export GInteractions as 'bedpe' or 'pairs'
                        files
ginteractions-filter-overlaps
                        Filter GInteractions overlapping with a GRanges
ginteractions-find-overlaps
                        Find overlaps between a query GInteractions and
                        a GRanges
ginteractions-join-overlap-left
                        Join overlaps between a query GInteractions and
                        a GRanges
group-group_data        GInteractions grouping metadata
pair_granges            Pairwise combination of a GRanges object
pin                     Pin GInteractions by anchors set (anchors1 or
                        anchors2).
plyinteractions-data    Data files provided in the plyinteractions
                        package
plyinteractions-flank   Generate flanking regions from pinned anchors
                        of a GInteractions object
plyinteractions-shift   Shift pinned anchors of a GInteractions object
                        with plyinteractions
plyranges-stretch       Stretch pinned anchors of a GInteractions
                        object with plyranges
replace_anchors         Replace anchors of a GInteractions
show-GInteractions      show method for 'GInteractions' objects
