R: rqt: utilities for gene-level meta-analysis

# rqt: utilities for gene-level meta-analysis

## Documentation for package ‘rqt’ version 1.38.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

build.null.model | Applies linear of logistic regregression to the data.
covariates | This function performs an access to covariates
covariates-method | This function performs an access to covariates
geneTest | This function performs a gene-level test based on combined effect sizes.
geneTest-method | This function performs a gene-level test based on combined effect sizes.
geneTestMeta | This function performs a gene-level meta-analysis based on combined effect sizes.
geneTestMeta-method | This function performs a gene-level meta-analysis based on combined effect sizes.
geneTestOne | get.reg.family
genotype | This function performs an access to genotype.
genotype-method | This function performs an access to genotype.
get.a | Get a given STT
get.reg.family | get.reg.family
phenotype | This function performs an access to phenotype
phenotype-method | This function performs an access to phenotype
preprocess | Preprocess input data with Principal Component Analysis method (PCA)
preprocessLASSO | preprocessLASSO
preprocessPCA | preprocessPCA
preprocessPLS | preprocessPLS
preprocessRidge | preprocessLASSO
print.rqt | General functions of 'rqt' such as accessors and printing.
results | This function performs an access to covariates
results-method | This function performs an access to covariates
ridge_se | Importing required packages and functions
rqt | The rqt class constructor
rqt-class | The rqt class
rqt-general | General functions of 'rqt' such as accessors and printing.
show.rqt | General functions of 'rqt' such as accessors and printing.
simple.multvar.reg | Applies linear of logistic regregression to the data.
summary.rqt | General functions of 'rqt' such as accessors and printing.
vcov_ridge | vcov_ridge: returns variance-covariance matrix and standard deviation for ridge/LASSO regression object