Package: DominoEffect
Type: Package
Title: Identification and Annotation of Protein Hotspot Residues
Version: 1.30.0
Author: Marija Buljan and Peter Blattmann
Maintainer: Marija Buljan <marija.buljan.2@gmail.com>, Peter Blattmann
 <peter_blattmann@bluewin.ch>
Description: The functions support identification and annotation of
        hotspot residues in proteins. These are individual amino acids
        that accumulate mutations at a much higher rate than their
        surrounding regions.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
Depends: R(>= 3.5)
Imports: biomaRt, data.table, utils, stats, Biostrings, pwalign,
        SummarizedExperiment, VariantAnnotation, AnnotationDbi,
        Seqinfo, IRanges, GenomicRanges, methods
Suggests: knitr, testthat, rmarkdown
RoxygenNote: 6.0.1
VignetteBuilder: knitr
biocViews: Software, SomaticMutation, Proteomics, SequenceMatching,
        Alignment
NeedsCompilation: no
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:43:24 UTC
RemoteUrl: https://github.com/bioc/DominoEffect
RemoteRef: RELEASE_3_22
RemoteSha: 6694070015b1aba7738043b98da65de618f3696f
Packaged: 2025-11-11 17:03:46 UTC; root
Built: R 4.5.2; ; 2025-11-11 17:13:22 UTC; windows
