# RolDE: Robust longitudinal Differential Expression

## Documentation for package ‘RolDE’ version 1.16.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

data1 | A proteomics dataset with random protein expression values - no missing values.
data2 | A small dataset with 50 proteins and 30 samples for the example usage of RolDE
data3 | A semi-simulated UPS1 spike-in dataset with differences in longitudinal expression for the spike-in proteins - no missing values.
des_matrix1 | A RolDE design matrix for data1
des_matrix2 | A RolDE design matrix for data2
des_matrix3 | A RolDE design matrix for data3
plotFindings | Plot RolDE results
res1 | RolDE results for data1
res3 | RolDE results for data3
RolDE | Robust longitudinal Differential Expression
RolDE_Main | Robust longitudinal Differential Expression