VERSION 1.8.5
-------------------------

  o testEnrichment: no "Unknown or uninitialised column" warnings on
    sequencing results; the estimate's 1024 / -1022 sentinels are documented.
  o Vignettes: an install chunk for the Suggests the examples load; the
    Manhattan and feature-aggregation chunks cache their own data; MM285
    examples use the MM285 TFBS database; the HM450 Zenodo example uses an
    HM450 query; the sequencing quick start runs on the shipped single cell;
    the bedToCg example is self-contained; permutation chunks are seeded.
  o Manual: loadDBs, testEnrichmentSpearman and df_master are internal; no
    developer notes or local paths in examples.

VERSION 1.8.4
-------------------------

  o bedToCg: the bedtools/yame pipeline reached sh -c unquoted, so sh ran a
    bare `yame` and the output file was empty. It is now quoted.
  o testEnrichment2: the odds ratio is computed in double precision. Integer
    counts from YAME overflowed on genome-scale tables and gave NA estimates.
  o testEnrichment2: an unmeetable min_overlap returns the empty result
    without a second warning.
  o KYCG_plotEnrichAll: geom_segment(linewidth=), not the deprecated size=.

VERSION 1.8.3
-------------------------

  o testEnrichmentSEA: the two tails now share one pooled permutation
    null, so the p-value no longer depends on the sign of the query
    (zhou-lab/knowYourCG#6)
  o testEnrichmentSEA: document the sign of estimate. Positive means the
    set is enriched at small values, negative at large values.

VERSION 0.99.0
-------------------------

  o First submission of knowYourCG package to Bioconductor
